EY649770

Overview
NameEY649770
Unique NameEY649770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_CHLFU (Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.682e-19
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query:   16 NNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            NNAGFPHN+VFDEDE+PSG +    ++S ED LN PGE+Y+      GTY ++C PHQGAGM G +TV
Sbjct:   32 NNAGFPHNIVFDEDEVPSGANAE--ALSHEDYLNAPGESYSAKFDTAGTYGYFCEPHQGAGMKGTITV 97          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SCEOB (Plastocyanin, chloroplastic OS=Scenedesmus obliquus GN=PETE PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.399e-17
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 1
Query:   16 NNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            NNAGFPHN+VFDED +P+GV+    ++S +D LN PGE+Y       G Y ++C PHQGAGMVG+V V
Sbjct:   79 NNAGFPHNIVFDEDAVPAGVNAD--ALSHDDYLNAPGESYTAKFDTAGEYGYFCEPHQGAGMVGKVIV 144          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_ENTPR (Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.945e-17
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            F NNAGFPHN+VFDED +P+GVD   IS   ED LN  G+T    LT  GTY  YC PH GAGM   +TV
Sbjct:   30 FINNAGFPHNIVFDEDAVPAGVDADAIS--AEDYLNSKGQTVVRKLTTPGTYGVYCDPHSGAGMKMTITV 97          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_ULVPE (Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 39/70 (55.71%), Postives = 45/70 (64.29%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            F NNAGFPHN+VFDED +P+GVD   IS   +D LN  GET    L+  G Y  YC PH GAGM   +TV
Sbjct:   30 FVNNAGFPHNIVFDEDAVPAGVDADAISY--DDYLNSKGETVVRKLSTPGVYGVYCEPHAGAGMKMTITV 97          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_ULVAR (Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 39/70 (55.71%), Postives = 45/70 (64.29%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            F NNAGFPHN+VFDED +P+GVD   IS   +D LN  GET    L+  G Y  YC PH GAGM   +TV
Sbjct:   30 FVNNAGFPHNIVFDEDAVPAGVDADAISY--DDYLNSKGETVVRKLSTPGVYGVYCEPHAGAGMKMTITV 97          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_CYAP7 (Plastocyanin OS=Cyanothece sp. (strain PCC 7424) GN=petE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.387e-14
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 1
Query:   16 NNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            NN   PHN VFD  ++P  V  +KIS     L+  PGE++  T  E GTY++YC PH+GAGMVG +TV
Sbjct:   61 NNKLAPHNAVFDNSKVPDSVSATKISHKA--LVFSPGESFTTTFDEPGTYTYYCEPHRGAGMVGTITV 126          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_PROHO (Plastocyanin OS=Prochlorothrix hollandica GN=petE PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            F  N   PHNV+FD+  +P+G   S  ++S   L   PG  Y+VTL   GTYSFYC+PH+GAGMVG +TV
Sbjct:   65 FVMNKVGPHNVIFDK--VPAGE--SAPALSNTKLAIAPGSFYSVTLGTPGTYSFYCTPHRGAGMVGTITV 130          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_PHOLA (Plastocyanin OS=Phormidium laminosum GN=petE PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12
Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 1
Query:   16 NNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEK---GTYSFYCSPHQGAGMVGQVTV 219
            NN   PHN++FD+ ++P         +S   L+  PGE+Y +T +     GTY++YC+PH+GAGMVG++TV
Sbjct:   67 NNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAPHRGAGMVGKITV 137          
The following BLAST results are available for this feature:
BLAST of EY649770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PLAS_CHLFU5.682e-1958.82Plastocyanin OS=Chlorella fusca GN=petE PE=1 SV=1[more]
PLAS_SCEOB1.399e-1755.88Plastocyanin, chloroplastic OS=Scenedesmus obliquu... [more]
PLAS_ENTPR6.945e-1758.57Plastocyanin OS=Enteromorpha prolifera GN=PETE PE=... [more]
PLAS_ULVPE1.003e-1555.71Plastocyanin OS=Ulva pertusa GN=PETE PE=1 SV=1[more]
PLAS_ULVAR1.003e-1555.71Plastocyanin OS=Ulva arasakii GN=PETE PE=1 SV=1[more]
PLAS_CYAP79.387e-1450.00Plastocyanin OS=Cyanothece sp. (strain PCC 7424) G... [more]
PLAS_PROHO8.786e-1251.43Plastocyanin OS=Prochlorothrix hollandica GN=petE ... [more]
PLAS_PHOLA8.786e-1242.25Plastocyanin OS=Phormidium laminosum GN=petE PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649770 ID=EY649770; Name=EY649770; organism=Citrus sinensis; type=EST; length=418bp
AAAGATGTGTTCAAGAACAATGCTGGGTTCCCACACAACGTTGTTTTCGA
TGAAGATGAGATTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTA
CAGAAGACCTTCTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACT
GAAAAAGGCACTTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCAT
GGTTGGACAAGTGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCT
CATCTCATTGGTTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATAC
ATATTTTCATTTGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCA
AGCCAATAAACCTCTGTATTTTCCATTTATTTCAAATGCAGATTTGTGAT
GTAAAAAAAAAAAAAAAA
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