EY702839

Overview
NameEY702839
Unique NameEY702839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIY (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   58 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR+      D  +  M+T P+T G++E  I EI KIIH     +Y DG  +N  +G+  PG +G D+
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILREIVN---DKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPGDMGFDI 271          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   58 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR+      D  +  M+T P+T G++E  I EI KIIH     +Y DG  +N  +G+  PG +G D+
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILREIVN---DKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPGDMGFDI 271          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIM (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   58 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR+      D  +  M+T P+T G++E  I EI KIIH     +Y DG  +N  +G+  PG +G D+
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILREIVN---DKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPGDMGFDI 271          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIL (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   58 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR+      D  +  M+T P+T G++E  I EI KIIH     +Y DG  +N  +G+  PG +G D+
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILREIVN---DKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPGDMGFDI 271          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIK (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   58 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR+      D  +  M+T P+T G++E  I EI KIIH     +Y DG  +N  +G+  PG +G D+
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILREIVN---DKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPGDMGFDI 271          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.27) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   58 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR+      D  +  M+T P+T G++E  I EI KIIH     +Y DG  +N  +G+  PG +G D+
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILREIVN---DKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPGDMGFDI 271          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_HALSA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Halobacterium salinarium GN=gcvPB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.565e-35
Identity = 86/246 (34.96%), Postives = 135/246 (54.88%), Query Frame = 1
Query:   67 VETAIPSGLTRES---PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            V+ ++P  LTR++   P L  P         EL R+   L  +   +     PLGSCTMK N          P+ A +HP       QG   + ++L ++L  I G D+ +LQP AGAAGE+ G+++  AYH+A    HRN  I+P +AHGTN A+AA+ G  ++ + +   G ++++ L  A     +N + LM+T P+T G++E  I+ I +++HD G  +Y DG  +NA +G   PG +G D+
Sbjct:   31 VDPSLPDDLTRDTVELPSLEEP---------ELARHYVRLSQQNYGVDSGPYPLGSCTMKYNPRFTEDAAALPAAA-VHPDRSETALQGTLAVMHDLQDYLGRIGGMDAVTLQPPAGAAGEFTGILIAEAYHEATDGGHRNEVIVPDAAHGTNFASAALGGYDVIELPSGDDGRVDLDALEAALG---ENTAALMLTNPNTLGLFERDIEPIAEMVHDAGGLLYYDGANLNALLGRARPGDMGFDI 263          
BLAST of EY702839 vs. ExPASy Swiss-Prot
Match: GCSPB_SULTO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus tokodaii GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.058e-33
Identity = 83/247 (33.60%), Postives = 135/247 (54.66%), Query Frame = 1
Query:   55 LAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANMDNLSTLMVTYPSTHGVYEXGIDEICKIIHDNGRSVYMDGGYMNAQVGLTSPGYIGADV 795
            L +E+   IP  L R+   L         +E E++R+   L      + + M+PLGSCTMK N   E          N+HP       QG  E+   + +WL  ITG D  SLQ  AGAAGE AG+++I+ YH+ +G  +R+  ++  +AHGTNPA+A+M   K++ + ++++G ++++ L+   E   +  +  M+T P+T G++E  I +I K IH     +Y DG  +N  +G+  PG +G D+
Sbjct:   32 LKKEISINIPEKLRRKEIDLPEL------SELEVIRHFIRLSQMSFGVDNGMVPLGSCTMKYNPKIEEEAELLTQ--NLHPLQDDSTVQGILEVLYYMQKWLAEITGMDLCSLQVPAGAAGELAGVLMIKKYHETKGRGNRDEMLVADTAHGTNPASASMENFKVIYIKSNSEGLVDVDILK---EIVSERTAGFMLTNPNTLGLFEENILDIAKYIHSVDAKLYYDGANLNGILGVVRPGDMGFDI 267          
The following BLAST results are available for this feature:
BLAST of EY702839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_SULIY4.294e-3535.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIN4.294e-3535.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIM4.294e-3535.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIL4.294e-3535.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIK4.294e-3535.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIA4.294e-3535.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_HALSA9.565e-3534.96Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULTO1.058e-3333.60Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-H04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702839 ID=EY702839; Name=EY702839; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAGTTTTCGCTGGGGGCAAATCAGTTCCATTCACTGCTGC
ATCTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGG
AGAGTCCGTATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCAT
GAATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATG
CCATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAA
CTGAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTT
GCCCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGG
TGAGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAA
ATGCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTAT
CATAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTC
AGCCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTG
TTTCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGG
AAGGCCGCAGAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTA
CCCTTCAACTCATGGAGTTTATGAANGAGGTATTGATGAGATATGCAAGA
TAATTCACGATAATGGGAGGTCAGTATATATGGACGGGGGCTACATGAAT
GCTCAGGTCGGTCTGACAAGCCCTGGTTACATTGGAGCTGATGTTTGCAT
CTCAATCTCACAAAAATTTTGCATTCGCATGGAGGGGTGGGCCTGGATGG
GCCCTATTGTGGGAAGAACACTTGCACCTTNCTGGCTNCCAT
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