EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.518e-66
Identity = 115/196 (58.67%), Postives = 155/196 (79.08%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   + A    V  YL+D YWEDIGTIEAF+NANL +T++P+P FSFYD  APIYT+ RYLPP+K+LD  VT+S+IGEGC++KNC+I HSV+G+RS I  G +IE++LLMGAD+Y+   +R+    KG +P+GIG ++ I+RAIIDKNARIG +VKI+N D+VQEA RE+ G++I+SGIV ++K+A+I  GTII
Sbjct:  234 GKEIIPDAAKDHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPPTKLLDCHVTESIIGEGCILKNCRIQHSVLGVRSRIETGCMIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAIIDKNARIGHDVKIINKDNVQEADRESQGFYIRSGIVVVLKNAVITDGTII 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.113e-65
Identity = 114/196 (58.16%), Postives = 155/196 (79.08%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   + +    V  YL+D YWEDIGTIEAF+NANL +T++P+P FSFYD  APIYT+ RYLPP+K+LD  VT+S+IGEGC++KNC+I HSV+G+RS I  G +IE++LLMGAD+Y+   +R+    KG +P+GIG ++ I+RAIIDKNARIG +VKI+N D+VQEA RE+ G++I+SGIV ++K+A+I  GTII
Sbjct:  234 GKEIIPDASKDHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPPTKLLDCHVTESIIGEGCILKNCRIQHSVLGVRSRIETGCVIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAIIDKNARIGHDVKIINKDNVQEADRESQGFYIRSGIVVVLKNAVITDGTII 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.105e-64
Identity = 114/196 (58.16%), Postives = 150/196 (76.53%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   + A    V  YL+D YW DIGTIEAF+ ANLG+TK+PIP FSFYD  APIYT+ RYLPP+K+L+ADVT+S+I EGC+IKNC+IHHSV+G+R+ +     IEDT++MGADYY+    R+    +G  PIGIG+ + I+RAIIDKNARIG NV IVN ++V+E+ RE  GY+I+SGI  ++K+A+IP GT+I
Sbjct:  234 GKEIIPDAAKDYNVQAYLFDDYWADIGTIEAFYEANLGLTKQPIPPFSFYDEKAPIYTRARYLPPTKVLNADVTESMISEGCIIKNCRIHHSVLGIRTRVEADCTIEDTMIMGADYYQPYEKRQDCLRRGKPPIGIGEGTTIRRAIIDKNARIGKNVMIVNKENVEESNREELGYYIRSGITVVLKNAVIPDGTVI 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.105e-64
Identity = 111/196 (56.63%), Postives = 152/196 (77.55%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   + +    V  YL+D YWEDIGTIEAF++ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  +T+S+IGEGC++KNC+I HSV+G+RS I  G +IE++LLMGAD+Y+   +R+    +  +P+GIG ++ I+ AIIDKNARIG +VKIVN D+VQEA RE  G++I+SGIV ++K+A+IP GTII
Sbjct:  234 GKEIIPDASKDYNVQAYLFDDYWEDIGTIEAFYHANLALTQQPQPPFSFYDEHAPIYTRARYLPPTKLLDCQITESIIGEGCILKNCRIQHSVLGVRSRIESGCVIEESLLMGADFYQASVERQCSLIENDIPVGIGTDTIIRGAIIDKNARIGHDVKIVNKDNVQEAERENQGFYIRSGIVVVLKNAVIPDGTII 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP4 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glgC PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.504e-62
Identity = 110/196 (56.12%), Postives = 151/196 (77.04%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E     A+   V TYL++ YWEDIGTI +F+ ANL +T++P P FSFYD  APIYT+PRYLPPSK+LD  VT+S+IGEGC++KNC+I HSV+G+RS I  G +I++ LLMGAD+Y+  A+R       SVP+GIG ++ ++RAI+DKNA IG NVKIVN D V+EA RE++G++I++GIV ++K+A+IP  T+I
Sbjct:  234 GKEIIPMAATDHNVQTYLFNDYWEDIGTISSFYEANLALTRQPQPPFSFYDEKAPIYTRPRYLPPSKLLDCQVTESIIGEGCILKNCQIQHSVLGVRSRIESGCVIDNALLMGADFYQPFAERDHKIKNNSVPLGIGADTIVRRAIVDKNACIGRNVKIVNKDHVEEANRESEGFYIRNGIVVVLKNAVIPDNTVI 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.565e-62
Identity = 114/196 (58.16%), Postives = 149/196 (76.02%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   + AS   +  YL+D YWEDIGTIEAF+ ANL +TK+P PDFSFY+  APIYT+ RYLPP+KML++ VT+S+IGEGC+IK C+IHHSV+G+RS I     IEDTL+MG D+YE+ ++R  L A+G +  GIG  + I+RAIIDKNARIG NV IVN ++VQEA RE  G++I++GIV +IK+  I  GT+I
Sbjct:  244 GKEIIPDSASDHNLQAYLFDDYWEDIGTIEAFYEANLALTKQPSPDFSFYNEKAPIYTRGRYLPPTKMLNSTVTESMIGEGCMIKQCRIHHSVLGIRSRIESDCTIEDTLVMGNDFYESSSERDTLKARGEIAAGIGSGTTIRRAIIDKNARIGKNVMIVNKENVQEANREELGFYIRNGIVVVIKNVTIADGTVI 439          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.350e-62
Identity = 102/186 (54.84%), Postives = 149/186 (80.11%), Query Frame = 1
Query:   49 GMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G R+ +Y++D YWEDIGTI AF+ ANL +T++P P FSFYD   PIYT+PRYLPPSK++D+ +TDS+IGEG ++K+C IHHSV+G+RS + +  +++D+LLMG+D++E+ ++R  L  +G +P+G+GK + +KRAI+DKNARIG NV IVN D V+EA R   G++I++GIV ++K+A IP GT+I
Sbjct:  246 GDRLKSYVFDDYWEDIGTIGAFYEANLALTQQPTPPFSFYDAEFPIYTRPRYLPPSKLVDSQITDSIIGEGSILKSCSIHHSVLGVRSRVEDEVVLQDSLLMGSDFFESSSERAVLRERGGIPLGVGKGTTVKRAILDKNARIGSNVTIVNKDHVEEADRPEHGFYIRNGIVVVVKNASIPDGTVI 431          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.350e-62
Identity = 109/196 (55.61%), Postives = 146/196 (74.49%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E      +   +  YLY GYWEDIGTIEAF+ +NL +T++P P FSFYD  APIYT+PRYLPP+K+L+  +T+S+I EGC++K+C+IHHSV+G+RS +     IED++LMGADYYE+   R+ +   G VP GIG  + I+RAIIDKNARIG NV I+N D ++EA RE +G+ I+SGIV +IK+A IP GT+I
Sbjct:  234 GKEIIPGAKTDYNLQAYLYKGYWEDIGTIEAFYESNLALTQQPQPPFSFYDEKAPIYTRPRYLPPTKVLNCTITESMISEGCILKDCRIHHSVLGIRSRVESDCTIEDSMLMGADYYESSTKRKAVLEAGKVPQGIGAGTTIRRAIIDKNARIGRNVLIINKDRIEEAEREDEGFLIRSGIVVVIKNATIPDGTVI 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.171e-61
Identity = 107/196 (54.59%), Postives = 151/196 (77.04%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E     A    +  YL+ GYWEDIGTIEAF+ ANL + ++P P FSFY+  APIYT+ R LPP+K+L+ ++T+S+I EGC+IK+C+IH+SV+G+RS I    ++ED+LLMGADYYE+   R+ L  +G +P+GIGK S I+RAI+DKNARIG NV IVN ++++E+ RE DG++I++GIV +IK+A+IP GT+I
Sbjct:  234 GKEIIPGAAKDYNLQAYLFKGYWEDIGTIEAFYEANLALNRQPRPSFSFYNEKAPIYTRARNLPPTKVLNCNITESMISEGCMIKDCRIHNSVLGIRSRIETDCVVEDSLLMGADYYESLETRQSLLDQGKIPVGIGKGSTIRRAIVDKNARIGQNVTIVNKENIEESNREDDGFYIRNGIVVVIKNAVIPDGTVI 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.006e-58
Identity = 107/191 (56.02%), Postives = 140/191 (73.30%), Query Frame = 1
Query:   40 PASGMRVPT--YLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            PA+  R  T  +L++ YWEDIGTI +F+ ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  VT S+IGEGC++K C + +SV+G+RS I    +I+D LLMGAD+YET   R    A G VP+GIG  S I+RAI+DKNA IG NV+IVN D V+EA RE  G+ I+SGIV ++K A+IP  T+I
Sbjct:  240 PAAATRYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPPTKLLDCQVTQSIIGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGADFYETSELRHQNRANGKVPMGIGSGSTIRRAIVDKNAHIGQNVQIVNKDHVEEADREDLGFMIRSGIVVVVKGAVIPDNTVI 430          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGC_ANASP8.518e-6658.67Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_ANAVT1.113e-6558.16Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_SYNP26.105e-6458.16Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_NOSP76.105e-6456.63Glucose-1-phosphate adenylyltransferase OS=Nostoc ... [more]
GLGC_CYAP41.504e-6256.12Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNY32.565e-6258.16Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNPW3.350e-6254.84Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAP73.350e-6255.61Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_CYAA52.171e-6154.59Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNP65.006e-5856.02Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
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