EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.006e-58
Identity = 107/191 (56.02%), Postives = 140/191 (73.30%), Query Frame = 1
Query:   40 PASGMRVPT--YLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            PA+  R  T  +L++ YWEDIGTI +F+ ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  VT S+IGEGC++K C + +SV+G+RS I    +I+D LLMGAD+YET   R    A G VP+GIG  S I+RAI+DKNA IG NV+IVN D V+EA RE  G+ I+SGIV ++K A+IP  T+I
Sbjct:  240 PAAATRYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPPTKLLDCQVTQSIIGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGADFYETSELRHQNRANGKVPMGIGSGSTIRRAIVDKNAHIGQNVQIVNKDHVEEADREDLGFMIRSGIVVVVKGAVIPDNTVI 430          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGS_MAIZE (Glucose-1-phosphate adenylyltransferase small subunit (Fragment) OS=Zea mays GN=GLG1 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.610e-56
Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 1
Query:  235 VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYY-ETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYY ET+AD++ LA  G +PIGIGKNSHI++AIIDKNARIGDNVKI+N+D+VQEAARETDGYFIK GIVT+IKDAL+PSGT+I
Sbjct:    1 VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYAETEADKKLLAENGGIPIGIGKNSHIRKAIIDKNARIGDNVKILNADNVQEAARETDGYFIKGGIVTVIKDALLPSGTVI 125          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.747e-56
Identity = 97/188 (51.60%), Postives = 142/188 (75.53%), Query Frame = 1
Query:   43 ASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            A    +  YL+ GYWEDIGTI+AF+ ANL + ++P P FSFY+   PIYT+ RYLPP+K L+  +T+S++ EGC++K+C+IH+S++G+R+ I     IEDT+LMGADYYE+ + R   A +G +P+GIG+ S I+RAI+DKNARIG NV IVN +++ E+ +E  G++I++GIV I+K+A I  GT+I
Sbjct:  242 AKDYNLQAYLFKGYWEDIGTIKAFYEANLALNRQPSPRFSFYNEEYPIYTRSRYLPPTKALNCTITESMVSEGCILKDCRIHNSILGIRTRIEANCTIEDTMLMGADYYESPSLRESKAQEGKIPMGIGEGSTIRRAIVDKNARIGRNVTIVNKENIDESNQEESGFYIRNGIVVILKNATIADGTVI 429          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.360e-52
Identity = 98/183 (53.55%), Postives = 132/183 (72.13%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  YL++ YWEDIGTI +FF ANL +T+ P P FSFYD + PIYT  R LPPS + ++ + DS++  G  + NC + HSVVG+RS I     ++DT+++GADYYETDA+ R   A+G VP+GIG+N+ IK  IIDKNARIG NV I NS+ VQEA R ++G+++ SGI  I K++ IP GT+I
Sbjct:  302 VKAYLFNDYWEDIGTIRSFFRANLALTEHP-PRFSFYDATKPIYTSRRNLPPSAIDNSKIVDSIVSHGIFLTNCFVEHSVVGIRSRIGTNVHLKDTVMLGADYYETDAEIRSQLAEGKVPLGIGENTRIKDCIIDKNARIGKNVVIANSEGVQEADRSSEGFYMASGITVISKNSTIPDGTVI 483          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.194e-51
Identity = 90/183 (49.18%), Postives = 135/183 (73.77%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  Y++  YWEDIGTI++F+NA+L +T++  P+F FYD   P YT PR+LPP+K+ +  + D++I  GC +++C + HS+VG RS +  G  ++DT +MGADYY+T+++   L A+G VPIGIG+N+ I++ IIDKNA+IG NV I+N D VQEA R  +G++I+SGI+ I++ A I  GT+I
Sbjct:  289 VQAYIFKDYWEDIGTIKSFYNASLALTQE-FPEFQFYDPKTPFYTSPRFLPPTKIDNCKIKDAIISHGCFLRDCSVEHSIVGERSRLDCGVELKDTFMMGADYYQTESEIASLLAEGKVPIGIGENTKIRKCIIDKNAKIGKNVSIINKDGVQEADRPEEGFYIRSGIIIILEKATIRDGTVI 470          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 5.927e-51
Identity = 95/183 (51.91%), Postives = 134/183 (73.22%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  YL++ YWEDIGTI +FF ANL +T+ P   FSFYD + PIYT  R LPPSK+ ++ + DS+I  G  + NC I HS+VG+RS +     ++DT+++GADYYET+A+   L A+G+VPIGIG+N+ I+  IIDKNAR+G NV I NS+ +QEA R +DG++I+SGI  I+K+++I  G +I
Sbjct:  341 VNAYLFNDYWEDIGTIRSFFEANLALTEHP-GAFSFYDAAKPIYTSRRNLPPSKIDNSKLIDSIISHGSFLTNCLIEHSIVGIRSRVGSNVQLKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTKIQECIIDKNARVGKNVIIANSEGIQEADRSSDGFYIRSGITVILKNSVIKDGVVI 522          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL1_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit (Fragment) OS=Triticum aestivum GN=AGA.1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.740e-51
Identity = 96/196 (48.98%), Postives = 136/196 (69.39%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E     A  + V  YL++ YWEDIGTI++FF ANL + ++P   FSFYD S P+YT  R LPPS +  + +TDS+I  GC +  C++ HSVVG+RS I     ++DT+++GAD+YETD +R    A+G VPIGIG+N+ I+  IIDKNARIG NV I N++ VQEA R ++G+ I+SGI  ++K+++I  G +I
Sbjct:  107 GSEIIPAAAREINVKAYLFNDYWEDIGTIKSFFEANLALAEQP-SKFSFYDASKPMYTSRRNLPPSMISGSKITDSIISHGCFLDKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDMERGDQLAEGKVPIGIGENTSIQNCIIDKNARIGKNVTIANAEGVQEADRASEGFHIRSGITVVLKNSVIADGLVI 301          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 3.842e-50
Identity = 86/180 (47.78%), Postives = 130/180 (72.22%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSG 597
            V  +L++ YWEDIGTI +FF+ANL +T++P P F FYD+  P +T PR+LPP+K+    + DS++  GC ++ C + HS+VG+RS +  G  ++DT++MGAD+Y+T+A+   L A+G VP+G+G+N+ IK  IIDKNA+IG NV I N+D V+E  R  +G+ I+SGI  ++K+A I  G
Sbjct:  337 VQAFLFNDYWEDIGTIGSFFDANLALTEQP-PKFQFYDQKTPFFTSPRFLPPTKVDKCRILDSIVSHGCFLRECSVQHSIVGIRSRLESGVELQDTMMMGADFYQTEAEIASLLAEGKVPVGVGQNTKIKNCIIDKNAKIGKNVVIANADGVEEGDRPEEGFHIRSGITVVLKNATIRDG 515          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL2_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 5.017e-50
Identity = 91/196 (46.43%), Postives = 134/196 (68.37%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   +      V  YL++ YWEDIGT+++FF+ANL +TK+P P F F D   P YT  R+LPP+K+  + + D++I  GC ++ C I HS+VG+RS +  G   +DT++MGADYY+T+ +   L A+G VPIG+G N+ I+  IIDKNA+IG +V I+N + V+EA R  +G++I+SGI  I+K+A I  GT+I
Sbjct:  325 GSEIIPSAVKDHNVQAYLFNDYWEDIGTVKSFFDANLALTKQP-PKFDFNDPKTPFYTSARFLPPTKVDKSRIVDAIISHGCFLRECNIQHSIVGVRSRLDYGVEFKDTMMMGADYYQTECEIASLLAEGKVPIGVGPNTKIQNCIIDKNAKIGKDVVILNKEGVEEADRSAEGFYIRSGITVIMKNATIKDGTVI 519          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.553e-50
Identity = 90/196 (45.92%), Postives = 134/196 (68.37%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G E   +      V  YL++ YWEDIGTI++FF++NL +T++P P F FYD   P YT  R+LPP+K+    + DS++  GC ++   I HS+VG+RS +  G   +DT++MGADYY+T+++   L A+G VP+G+G+N+ IK  IIDKNA+IG +V I N+D V+EA R  +G++I+SGI  I+K+A I  G +I
Sbjct:  328 GSEIIPSAVGESNVQAYLFNDYWEDIGTIKSFFDSNLALTQQP-PKFEFYDPKTPFYTSARFLPPTKVDRCKIVDSIVSHGCFLQESSIQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAEGKVPVGVGQNTKIKNCIIDKNAKIGKDVVIANTDGVEEADRPNEGFYIRSGITIILKNATIQDGLVI 522          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGC_SYNE75.006e-5856.02Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGS_MAIZE1.610e-5685.60Glucose-1-phosphate adenylyltransferase small subu... [more]
GLGC_CYAP82.747e-5651.60Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGL3_SOLTU5.360e-5253.55Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_SOLTU1.194e-5149.18Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_ARATH5.927e-5151.91Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_WHEAT7.740e-5148.98Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_ARATH3.842e-5047.78Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_SOLTU5.017e-5046.43Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_BETVU6.553e-5045.92Glucose-1-phosphate adenylyltransferase large subu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
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