EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL4_ARATH (Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.784e-47
Identity = 87/183 (47.54%), Postives = 126/183 (68.85%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  Y++  YWEDIGTI+ F+ ANL + ++  P F FYD   P YT PR+LPP+K     + DS+I  GC ++ C +  S++G RS +  G  ++DTL++GADYY+T+++   L A+G VPIGIGK++ I++ IIDKNA+IG NV I+N   VQEA R  +G++I+SGI  I++ A I  GT+I
Sbjct:  342 VQGYIFRDYWEDIGTIKTFYEANLALVEER-PKFEFYDPETPFYTSPRFLPPTKAEKCRMVDSIISHGCFLRECSVQRSIIGERSRLDYGVELQDTLMLGADYYQTESEIASLLAEGKVPIGIGKDTKIRKCIIDKNAKIGKNVIIMNKGDVQEADRPEEGFYIRSGITVIVEKATIQDGTVI 523          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.331e-47
Identity = 86/183 (46.99%), Postives = 128/183 (69.95%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  Y++  YWEDIGTI +FF+AN+ + ++P P F FYD   P +T PRYLPP+K     + +++I  GC ++ CKI HS++G+RS ++ G+ +++ ++MGAD YET+ +   L ++G VPIG+G+N+ I   IID NARIG +V I N + VQEA R  +GY+I+SGIV I K+A I  GT++
Sbjct:  341 VQAYVFTDYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIISHGCFLRECKIEHSIIGVRSRLNSGSELKNAMMMGADSYETEDEISRLMSEGKVPIGVGENTKISNCIIDMNARIGRDVVISNKEGVQEADRPEEGYYIRSGIVVIQKNATIKDGTVV 522          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.331e-47
Identity = 86/183 (46.99%), Postives = 128/183 (69.95%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  Y++  YWEDIGTI +FF+AN+ + ++P P F FYD   P +T PRYLPP+K     + +++I  GC ++ CKI HS++G+RS ++ G+ +++ ++MGAD YET+ +   L ++G VPIG+G+N+ I   IID NARIG +V I N + VQEA R  +GY+I+SGIV I K+A I  GT++
Sbjct:  342 VQAYVFTDYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIISHGCFLRECKIEHSIIGVRSRLNSGSELKNAMMMGADSYETEDEISRLMSEGKVPIGVGENTKISNCIIDMNARIGRDVVISNKEGVQEADRPEEGYYIRSGIVVIQKNATIKDGTVV 523          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL3_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 8.856e-47
Identity = 85/183 (46.45%), Postives = 129/183 (70.49%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  Y+Y  YWEDIGTI++F+ AN+ + ++  P F FYD++ P YT PR+LPP+K     + +SVI  GC +  C I  S++G RS +  G  ++DTL++GAD Y+T+++   L A+G+VPIGIG+++ I++ IIDKNA+IG NV I+N D V+EA R  +G++I+SGI  +++ A I  GT+I
Sbjct:  340 VQGYIYRDYWEDIGTIKSFYEANIALVEEH-PKFEFYDQNTPFYTSPRFLPPTKTEKCRIVNSVISHGCFLGECSIQRSIIGERSRLDYGVELQDTLMLGADSYQTESEIASLLAEGNVPIGIGRDTKIRKCIIDKNAKIGKNVVIMNKDDVKEADRPEEGFYIRSGITVVVEKATIKDGTVI 521          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.670e-45
Identity = 85/183 (46.45%), Postives = 126/183 (68.85%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V   ++ GYWED+GTI++FF+ANL +T++P   F FYD   P +T PR LPP+++    +  + I +GC+++ C I HSV+G+ S +S G  ++D+++MGAD YET+ +   L   G VP+GIG+N+ I+  IID NARIG NV I NS  +QEA    +GY+I+SGIV I+K+A I  G++I
Sbjct:  335 VQACIFTGYWEDVGTIKSFFDANLALTEQP-SKFDFYDPKTPFFTAPRCLPPTQLDKCKMKYAFISDGCLLRECNIEHSVIGVCSRVSSGCELKDSVMMGADTYETEEEASKLLLAGKVPVGIGRNTKIRNCIIDMNARIGKNVVITNSKGIQEADHPEEGYYIRSGIVVILKNATINDGSVI 516          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.728e-42
Identity = 83/183 (45.36%), Postives = 122/183 (66.67%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            V  Y++  YWEDIGTI +FF+AN  + ++P P F FYD   P +T PRYLPP+K     + +++I  GC ++ CKI H+     S ++ G+ +++ ++MGAD YET+ +   L ++G VPIG+G+N+ I   IID NARIG +V I N + VQEA R  +GY+I+SGIV I K+A I  GT++
Sbjct:  322 VQAYVFTDYWEDIGTIRSFFDANRALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIILHGCFLRECKIEHTAF---SRLNSGSELKNAMMMGADSYETEDEMSRLMSEGKVPIGVGENTKISNCIIDMNARIGRDVVISNKEGVQEADRPEEGYYIRSGIVVIQKNATIKDGTVV 500          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.373e-38
Identity = 77/185 (41.62%), Postives = 118/185 (63.78%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG--YFIKSGIVTIIKDALIPSGTII 606
            V  Y++  YWEDIGTI +FF+AN+ + ++P P F FYD   P +T PRYLPP+K     + D++I  GC ++ C I HS+VG+ S ++ G  +++T++MGAD YET+ +   L A+G VPIG+G+N+ I   IID N + G   ++ N    +  + +  G    I+SGIV ++K+A I  GT+I
Sbjct:  339 VQAYVFTDYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAIISHGCFLRECAIEHSIVGVPSRLNSGCELKNTMMMGADLYETEDEISRLLAEGKVPIGVGENTKISNCIIDMNCQ-GWKERLHNKQRGRSKSPDRPGRRILIRSGIVVVLKNATIKDGTVI 521          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGL2_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.362e-37
Identity = 74/150 (49.33%), Postives = 102/150 (68.00%), Query Frame = 1
Query:   19 GPESHKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKN 468
            G E     A  + V  YL++ YWEDIGTI++FF ANL + ++P   FSFYD S P+YT  R LPPS +  + +TDS+I  GC +  C++ HSVVG+RS I     ++DT+++GAD+YETDA+R    A+G VPIGIG+N+ I+  IID N
Sbjct:   33 GSEIIPAAAREINVKAYLFNDYWEDIGTIKSFFEANLALAEQP-SKFSFYDASKPMYTSRRNLPPSMISGSKITDSIISHGCFLDKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDAERGDQLAEGKVPIGIGENTSIQNCIIDMN 181          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_THERP (Glucose-1-phosphate adenylyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 54/189 (28.57%), Postives = 100/189 (52.91%), Query Frame = 1
Query:   55 RVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI----VNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            RV TY +DGYW+D+GT+++++ AN+ + +   P  + YD +  I+T+    PP+K+L+ A V  S++  GC+++   +  S++     +  GA++ D+++M      TD+              IG  + + R IIDK+  IG N  +     NS +  E +R      + +GI  + ++A++P G  I
Sbjct:  231 RVATYRFDGYWQDVGTVQSYWEANMALLEDE-PKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKAGAVVRDSIVM------TDS-------------VIGPGAVVDRCIIDKHVTIGANAYLGWGDDNSPNWLEPSR------LNTGITLVGRNAVVPPGVRI 393          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_THEAB (Glucose-1-phosphate adenylyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glgC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 59/182 (32.42%), Postives = 101/182 (55.49%), Query Frame = 1
Query:   55 RVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA-DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTII-KDALIPS 594
            RV  + +DGYW+D+GTI +++ +NL +T +PIP F+ +D +  IYT  + +PP+ + D+  V +S+I EGC I    + +SV+     I +G+I++++++M                     + IG+N +I+ AII +N  IGD VKI     V E A       + +  +T+I  D++I S
Sbjct:  230 RVFAFPFDGYWKDVGTIYSYWESNLELT-RPIPPFNIHDENWRIYTHSKEMPPAYIADSTKVKNSLISEGCEIYGA-VSNSVLAQGVEIGKGSIVKNSVIMS-------------------NVRIGENCYIENAIIAENVVIGDFVKI----GVGEFAESKLNKKVYNSEITVIGMDSIIES 386          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGL4_ARATH1.784e-4747.54Probable glucose-1-phosphate adenylyltransferase l... [more]
GLGL2_WHEAT2.331e-4746.99Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_HORVU2.331e-4746.99Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_ARATH8.856e-4746.45Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_MAIZE1.670e-4546.45Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_WHEAT1.728e-4245.36Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE3.373e-3841.62Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_HORVU6.362e-3749.33Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_THERP1.629e-1628.57Glucose-1-phosphate adenylyltransferase OS=Thermom... [more]
GLGC_THEAB4.740e-1632.42Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
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