EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_CORK4 (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=glgC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   25 ESHKNPASGMRVP--TYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQP-RYLPPSKMLDADVTDS-VIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKD 579
            E+H +  S   VP  T    GYW D+GT++AF+ A++ +     P F+ Y+R  PI+T     LPP+K +   +  S ++  GC+I    + +SV+G    + EGA +E  +LM                     + IGK + ++ AI+DKN R+GDN  ++  D  +++ R T     + G+V + K+
Sbjct:  238 EAHVHDFSRNVVPGETDRDHGYWRDVGTVDAFYEAHMDLISV-YPVFNLYNRKWPIHTSDDSNLPPAKFVKGGIAQSSIVAAGCIISAGTVRNSVLGPGVVVEEGASVEGCVLMDG-------------------VRIGKGAVVRHAILDKNVRVGDNA-LIGVDRARDSERFT---LSQGGVVCVPKN 402          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRU0 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.190e-16
Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG RV TY ++GYW+D+GTIE+ + AN+    +  P     +RS  IY++    PP+ + + A+VTDS++ +GC +   K+ HS++     + +GA I+D+ +M                 G+V   IG+ + I RAII + A IG+NV I  +D +Q
Sbjct:  229 SGERVYTYNFNGYWKDVGTIESLWEANMEYIAENNP-LDSRNRSWKIYSKNHIAPPNFISEHAEVTDSLVVDGCFVTG-KVDHSILSANVHMKQGAEIKDSFIM----------------SGAV---IGEGAKINRAIIGEGAIIGNNVVIDGTDEIQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRMU (Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans GN=glgC PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.190e-16
Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG RV TY ++GYW+D+GTIE+ + AN+    +   D    DRS  IY++    PP+ +  +A V DS++ +GC +   K+ HS++     + EGA I+D+ +M                 G+V   IG+ + I RAI+ + A+IG++V+I  ++ VQ
Sbjct:  229 SGERVYTYNFNGYWKDVGTIESLWEANMEYIGED-NDLHSRDRSWKIYSKNLIAPPNFITEEAHVKDSLVVDGCFVSG-KVEHSILSTNVQVKEGAQIKDSFIM----------------SGAV---IGEGAKITRAIVGEGAKIGEDVEIDGTEEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_THEM4 (Glucose-1-phosphate adenylyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgC PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   55 RVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 495
            RV  + ++GYW+D+GTI +++ +NL +T +PIP F+ +D +  IYT    +PP+ +  DA V +S+I EGC I   ++++SV+     + EG II+++++M                     + IG N  I+ AII +N  IG+ VKI
Sbjct:  230 RVYAFPFEGYWKDVGTIYSYWESNLELT-RPIPPFNIHDENWKIYTHSEEMPPAYISDDARVKNSLISEGCEIYG-EVYNSVLAQGVEVGEGVIIKNSVVMSR-------------------VRIGNNCFIENAIIAENVVIGNEVKI 356          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_EUBE2 (Glucose-1-phosphate adenylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgC PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 54/180 (30.00%), Postives = 96/180 (53.33%), Query Frame = 1
Query:   55 RVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIP 591
            R+  Y Y+GYW+D+GT+ +++ AN+ +    IP F+ Y+    IYT+   +PP  +  DA +  S+IG+G  +   ++ +SV+G    I EG +I D+++M   +                   IGKN+ I ++II ++  IG+NV++      +EA          SG+VT+ + ++IP
Sbjct:  231 RIFAYEYNGYWKDVGTLSSYWEANMELI-DIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGTEVYG-RVFNSVIGSGVVIEEGCVIRDSIIMNNSH-------------------IGKNTTITKSIIAEDVTIGENVEL---GVGEEAENVKFPKIYNSGLVTVGEWSVIP 386          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBCH (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio cholerae GN=glgC1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-----ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 588
            YW D+GTIE++++A++ +  K  P+FS Y+RS P++T    LPP+  +D       +TDS+I  G  I+   I+ SV+G RS I+ G+ I +++++G                    + IG    IKRAIIDK+  I     I+  D   +  R    +    GIV I K + +
Sbjct:  254 YWRDVGTIESYWSAHMDLLDKD-PEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILG-------------------DVKIGAGCTIKRAIIDKDVEIAAGT-IIGEDLEMDRKR---FHVSDEGIVVIAKGSKV 403          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_PHOPR (Glucose-1-phosphate adenylyltransferase OS=Photobacterium profundum GN=glgC PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 53/183 (28.96%), Postives = 88/183 (48.09%), Query Frame = 1
Query:   58 VPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA-----DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIK-SGIVTIIKDALI 588
            +P     GYW D+GTIEA++ A++ +  +  P FS Y+R   ++T    LPP+ +LD+     D+ + +I  G  I+  +IH S++G R+ +    +I +++++G                    + IG N  I++AIIDKN  I     I      +    +   Y +   GIV I K A I
Sbjct:  246 IPGEKNTGYWRDVGTIEAYWQAHMDLLSEDAP-FSLYNRQWQLHTHYPPLPPATILDSENSKVDINNCMISAGSYIRGAQIHKSILGFRTNVDHNTMISESVILG-------------------DVKIGANCSIRKAIIDKNVHIAPGTVI-----GENPEEDKKNYHVSDEGIVVIPKGAKI 403          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRA5 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype V GN=glgC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG RV TY +DGYW+D+GTIE+ + AN+    +     S  DRS  IY++    PP+ M  DA+V DS++ +GC +    + HS++     +   AII+D+ +M                       IG+ + I RAII ++A IGD V I  S  V+
Sbjct:  229 SGERVYTYNFDGYWKDVGTIESLWEANMEYIGEDNKLHS-RDRSWKIYSKNLIAPPNFMTEDANVKDSLVVDGCFVAG-NVEHSILSTNVQVKPNAIIKDSFVMSG-------------------ATIGEGAKINRAIIGEDAVIGDGVVIDGSKEVE 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRA3 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype III GN=glgC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG RV TY +DGYW+D+GTIE+ + AN+    +     S  DRS  IY++    PP+ M  DA+V DS++ +GC +    + HS++     +   AII+D+ +M                       IG+ + I RAII ++A IGD V I  S  V+
Sbjct:  229 SGERVYTYNFDGYWKDVGTIESLWEANMEYIGEDNKLHS-RDRSWKIYSKNLIAPPNFMTEDANVKDSLVVDGCFVAG-NVEHSILSTNVQVKPNAIIKDSFVMSG-------------------ATIGEGAKINRAIIGEDAVIGDGVVIDGSKEVE 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRA1 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype Ia GN=glgC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 55/158 (34.81%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG RV TY +DGYW+D+GTIE+ + AN+    +     S  DRS  IY++    PP+ M  DA+V DS++ +GC +    + HS++     +   AII+D+ +M                       IG+ + I RAII ++A IGD V I  S  V+
Sbjct:  229 SGERVYTYNFDGYWKDVGTIESLWEANMEYIGEDNKLHS-RDRSWKIYSKNLIAPPNFMTEDANVKDSLVVDGCFVAG-NVEHSILSTNVQVKPNAIIKDSFVMSG-------------------ATIGEGAKINRAIIGEDAVIGDGVVIDGSKEVE 365          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGC_CORK44.740e-1630.16Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_STRU06.190e-1634.81Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRMU6.190e-1634.18Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_THEM41.056e-1534.46Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLGC_EUBE22.352e-1530.00Glucose-1-phosphate adenylyltransferase OS=Eubacte... [more]
GLGC1_VIBCH2.352e-1532.18Glucose-1-phosphate adenylyltransferase 1 OS=Vibri... [more]
GLGC_PHOPR8.939e-1528.96Glucose-1-phosphate adenylyltransferase OS=Photoba... [more]
GLGC_STRA51.167e-1434.81Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRA31.167e-1434.81Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRA11.167e-1434.81Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
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