EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_VIBFM (Glucose-1-phosphate adenylyltransferase OS=Vibrio fischeri (strain MJ11) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIK 576
            YW D+GTIE+++ A++ + KK  P FS Y+R  P++T    LPP+   D+D     + DS++  G  I+  +I  SV+G RS I+    I +++L+G                    + +GK   ++R I+DK A I    +I VN    ++    +D      GIV I K
Sbjct:  254 YWRDVGTIESYWEAHMDLLKKDAP-FSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLG-------------------NVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKKYHVSD-----EGIVVIPK 399          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_VIBF1 (Glucose-1-phosphate adenylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIK 576
            YW D+GTIE+++ A++ + KK  P FS Y+R  P++T    LPP+   D+D     + DS++  G  I+  +I  SV+G RS I+    I +++L+G                    + +GK   ++R I+DK A I    +I VN    ++    +D      GIV I K
Sbjct:  254 YWRDVGTIESYWEAHMDLLKKDAP-FSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLG-------------------NVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKRYHVSD-----EGIVVIPK 399          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_ANAD2 (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13
Identity = 52/181 (28.73%), Postives = 89/181 (49.17%), Query Frame = 1
Query:   79 GYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML---DAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSG 597
            GYW D+G+I+A+F AN+ +     P FS Y+   PI+T     PP+K +   ++D      TDS++ EGC+I    +HHS++  +  ++  A ++++++     +E               + IG++  I+RAIIDK+  I  +  I               +  +SGIV I K   I +G
Sbjct:  256 GYWRDVGSIDAYFQANMDLVAVD-PVFSLYNDEWPIFTVQYNYPPAKFVFNNESDHRVGRATDSLVSEGCIISGSHVHHSILSPKVRVNSYATVDESIV-----FEN--------------VNIGRHCRIRRAIIDKHVDIPAHTTI----GYDHEKDRKHFHVTESGIVIIPKGMRIEAG 412          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_METFK (Glucose-1-phosphate adenylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.202e-13
Identity = 47/175 (26.86%), Postives = 88/175 (50.29%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML------DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIKDAL 585
            YW D+GT++A++ AN+ +T K +P+ + YDR  PI+T    LPP+K +          TDS+I  GC++    + +SV+     ++  + IE ++++                     + IG++  ++R ++D  ARI D ++I VN +  ++    T+      G+V +  D L
Sbjct:  270 YWRDVGTVDAYWEANMELT-KVVPELNLYDRQWPIWTYQEQLPPAKFVFDNEERRGQATDSLISGGCIVSGANVRNSVLFSDVRVNSYSSIEQSVIL-------------------PKVDIGRHVTLRRVVVDSGARIPDGMEIGVNLELDRKRFHITE-----QGVVLVTPDML 419          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_LACLM (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 51/165 (30.91%), Postives = 78/165 (47.27%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAF---------FNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 513
            +G  V  Y + GYW+D+GTI++           N  L IT K    +S  D SAP +   +         + V ++++G+GC +    IH S++     + EG  IED+ +M   +                   IG+N  IK AII +NA+IGDNV+I+  D V
Sbjct:  229 AGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYSHNDISAPQFITEK---------SKVKNALVGDGCYVDGTVIH-SILSQNVHVQEGTTIEDSFIMSGTF-------------------IGENVTIKNAIIGENAKIGDNVEIIGEDEV 364          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_FERNB (Glucose-1-phosphate adenylyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 46/148 (31.08%), Postives = 81/148 (54.73%), Query Frame = 1
Query:   55 RVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 495
            +V  Y ++GYW+D+GTI++++  NL +  +PIP F+ +D +   YT+   + P+ + +  +V +S+I EGC I    + +SV+     I EGAI++++++M                     + +GKN  I+ AII +N  I D  KI
Sbjct:  230 KVYAYPFEGYWQDVGTIQSYWETNLELV-RPIPPFNLHDPNWRFYTRSEEMNPAYISENGNVRNSIISEGCEIYG-SVENSVISQGVFIDEGAIVKNSVIM-------------------TKVEVGKNVIIEDAIIAENTIIKDGCKI 356          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_ANASK (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter sp. (strain K) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 51/181 (28.18%), Postives = 87/181 (48.07%), Query Frame = 1
Query:   79 GYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD--------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSG 597
            GYW D+G+I+A+F AN+ +     P FS Y+   PI+T     PP+K +  +         TDS++ EGC+I    +HHS++  +  ++  A ++++++     +E               + IG++  I+RAIIDK+  I  +  I               +  +SGIV I K   I +G
Sbjct:  256 GYWRDVGSIDAYFQANMDLVAVD-PVFSLYNDEWPIFTVQYNYPPAKFVFNNEHDHRVGRATDSLVSEGCIISGSHVHHSILSPKVRVNSYATVDESIV-----FEN--------------VNIGRHCRIRRAIIDKHVDIPAHTTI----GYDHEKDRKHFHVTESGIVIIPKGMRIEAG 412          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBPA (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio parahaemolyticus GN=glgC1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 51/174 (29.31%), Postives = 88/174 (50.57%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 588
            YW D+GTI+A++ A++ + +K  P FS Y+R  P++T    LPP+   D+D     + DS++  G  ++  +I  SV+G RS I+    I + +L+G                    + IG+   ++R I+DK+A I    +I    ++QE  +    +  + GIV I K A +
Sbjct:  254 YWRDVGTIDAYWQAHMDLLEKDAP-FSLYNRKWPLHTYYPPLPPATFTDSDNGRVQIIDSLVCNGSYVRGSRIEKSVLGFRSNIASACDISECILLG-------------------DVKIGEGCVLRRVIVDKDADIAPGTQI--GVNLQEDKKHF--HVSEEGIVVIPKGARV 403          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_LACLA (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13
Identity = 49/165 (29.70%), Postives = 80/165 (48.48%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAF---------FNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 513
            +G  V  Y + GYW+D+GTI++           N  L IT K    +S  D SAP +   +         ++V ++++G+GC +    +H S++     + EG +IED+ +M   +                   IG+N  IK AII +NA+IGDNV+I+  + V
Sbjct:  229 AGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYSHNDISAPQFITEK---------SNVKNALVGDGCYVDGTVLH-SILSQNVHVQEGTVIEDSFIMSGTF-------------------IGENVTIKNAIIGENAKIGDNVEIIGENEV 364          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_DEIDV (Glucose-1-phosphate adenylyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13
Identity = 54/189 (28.57%), Postives = 85/189 (44.97%), Query Frame = 1
Query:   31 HKNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIK 576
            H+NP  G   P      YW D+GTI+A++ AN+ +     P+F  Y+ S P+ T   + PP+K +           +SV+  G +I    +  SV+G        A+IE  +L                      + +G++SH+ RAI+DKN +I    KI V+ D      RE      +SG+V + K
Sbjct:  249 HRNPIPGQSNPNL----YWRDVGTIDAYYEANMDLISIN-PEFDIYNPSWPLRTSSEFSPPAKFVHESDGRKGQAFNSVMAGGVIISGATVRDSVLGRNIRAHSYALIESCVLFD-------------------DVEVGRHSHLNRAIVDKNVKIPPGTKIGVDHDH----DRERGFTVTESGVVVVPK 409          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGC_VIBFM1.686e-1330.99Glucose-1-phosphate adenylyltransferase OS=Vibrio ... [more]
GLGC_VIBF11.686e-1330.99Glucose-1-phosphate adenylyltransferase OS=Vibrio ... [more]
GLGC_ANAD21.686e-1328.73Glucose-1-phosphate adenylyltransferase OS=Anaerom... [more]
GLGC_METFK2.202e-1326.86Glucose-1-phosphate adenylyltransferase OS=Methylo... [more]
GLGC_LACLM2.875e-1330.91Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_FERNB2.875e-1331.08Glucose-1-phosphate adenylyltransferase OS=Fervido... [more]
GLGC_ANASK2.875e-1328.18Glucose-1-phosphate adenylyltransferase OS=Anaerom... [more]
GLGC1_VIBPA2.875e-1329.31Glucose-1-phosphate adenylyltransferase 1 OS=Vibri... [more]
GLGC_LACLA3.756e-1329.70Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_DEIDV3.756e-1328.57Glucose-1-phosphate adenylyltransferase OS=Deinoco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
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