EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_DECAR (Glucose-1-phosphate adenylyltransferase OS=Dechloromonas aromatica (strain RCB) GN=glgC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.093e-12
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 495
            YW D+GTI+A++ AN+ +T K  P+ + YDR  PI+T    +PP+K +  D        DS+I  GC+I    +  S++     +   A +ED++++       D D             IG+++ +KR +IDK+ RI + + I
Sbjct:  283 YWRDVGTIDAYWEANMEMT-KVTPELNVYDRDWPIWTYQEQIPPAKFVFDDEDRRGTAVDSLIAGGCIISGASVKRSLLFSSVNVHSWASVEDSVVL------PDVD-------------IGRHAVLKRCVIDKHCRIPEGMVI 406          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 50/187 (26.74%), Postives = 92/187 (49.20%), Query Frame = 1
Query:   49 GMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            G ++  + ++GYW D+GT+ +++ +NL +T +PIP  + YDR    +TQ   +PP+     + + +S+I EGC I    + +SV+     I E A+++++++M                       IG+N  I  A+I +   + + V I   D   +A  + D       I  I   ++IPSG++I
Sbjct:  228 GCQIYAFKFNGYWRDVGTVRSYWESNLELT-RPIPPLNLYDRHWRFFTQTEEMPPAYCAPTSKIVNSIISEGCEIYGF-VENSVIFQGVYIGENAVVKNSVVM-------------------TSTKIGENCVITDAVIAERVIVENRVIIGEGD---DAKNKLDSDVYTGQITVIGMYSVIPSGSVI 390          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_RHOE4 (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 44/151 (29.14%), Postives = 78/151 (51.66%), Query Frame = 1
Query:   79 GYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 528
            GYW D+GT++AF++A++ +     P F+ Y+R  PI      L P+K +   +  +SV+G G ++    + +SV+     I +GA +E ++LM                     + IGK + ++RAI+DKN  +GD  +I+  D  ++  R
Sbjct:  258 GYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNRRWPIRGATENLAPAKFVKGGLAQESVVGAGSILSAATVRNSVLSSNVMIEDGATVEGSVLMPG-------------------VRIGKGAVVRRAILDKNVVVGDG-EIIGVDLERDRER 387          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_CORJK (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium jeikeium (strain K411) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 49/173 (28.32%), Postives = 89/173 (51.45%), Query Frame = 1
Query:   79 GYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYT-QPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFI-KSGIVTIIKDALI 588
            GYW D+GT++AF+ A++ +     P F+ Y++  PI+T +   LPP+K +   +   S++  GC+I    + +SV+     + EGA +E  ++M                     + IG+ + ++ AIIDKN ++    +I+  D     AR+ D + I K G+V I K+ ++
Sbjct:  258 GYWRDVGTVDAFYEAHMDLISVH-PVFNLYNQQWPIHTAETGNLPPAKFVKGGIAQSSMVSAGCIISAGTVRNSVLSENVVVEEGASVEGCVIMPG-------------------VRIGRGAVVRHAIIDKNVQVSAG-EIIGVD----RARDQDRFTISKGGVVCIGKNVVV 405          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.864e-12
Identity = 51/182 (28.02%), Postives = 83/182 (45.60%), Query Frame = 1
Query:   76 DGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML---------DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPS 594
            D YW D+GT+EA++ AN+ +     P  + YDR  PI +    LPP K +           +  DS++ +G +I    +  SV+G    I+  A +ED++L                      + +G++S I+RAIIDK  +I    +I    ++  A   T      SG+V I +  +I S
Sbjct:  272 DAYWRDVGTLEAYYEANMDLVGVD-PQLNLYDRQWPIRSFQPQLPPPKFVFGSEGRSSRRGEALDSIVCQGAIISGGCVRRSVIGTGCRINSYAQVEDSILFD-------------------DVNVGRHSRIRRAIIDKGVQIPPETEIGYDLALDRARGLT---VTDSGLVVIARGEMIAS 430          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_NITMU (Glucose-1-phosphate adenylyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.864e-12
Identity = 44/174 (25.29%), Postives = 86/174 (49.43%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK-MLDAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDAL 585
            YW D+GT+EA++ ANL +  +  PD + YD+  PI+T    LPP+K + D D       DS++  GC+I    +  S++     +   +++ED++++                     + +G+N+ ++R ++DKN  I   ++ V  D V++       Y  ++G+  +  + L
Sbjct:  268 YWRDVGTVEAYWEANLDLV-QVTPDLNLYDQDWPIWTHQEQLPPAKFVFDNDDRRGQALDSMVSGGCIISGATVRRSLLFSNVQVRSYSVLEDSVIL-------------------PNVDVGRNARLRRVVVDKNCIIPPGLE-VGFDPVED---RKHFYVTETGVTLVTPEML 417          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_BURP8 (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 48/174 (27.59%), Postives = 80/174 (45.98%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM------LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDAL 585
            YW D+GTI+A++ ANL +    IP    YDR+ PI+T    LPP+K       L    T+ ++  GCVI   +I  SV+     ++    I + +L+                     + IG +  +++ +ID+   I D   ++  D V++  R    Y   SG+V +  +AL
Sbjct:  267 YWRDVGTIDAYWAANLDLAST-IPSLDLYDRNWPIWTHQEQLPPAKFVRDLNGLQGTGTNMIVCGGCVISGSQISRSVLSSNVVVNSFCNIAEAVLL-------------------PQVSIGASCRLRKVVIDRGCHIPDGT-VIGEDPVRDGER---FYRTDSGVVLVTAEAL 416          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_BIFAA (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 45/181 (24.86%), Postives = 88/181 (48.62%), Query Frame = 1
Query:   82 YWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA------DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 606
            YW D+GT++ F++A++ +    +P+F+ Y+   PIYT    LPP+K + A        TDS++  G ++   ++HHSV+     I   + + D++L                      + + + + + +AI+DKN  + +N   V  D+  + AR   G+ +    +T+     +P GT++
Sbjct:  261 YWRDVGTLKQFYDAHMDLISY-VPEFNLYNTEWPIYTLSGNLPPAKFVHAGRDRLGHATDSIVSPGVIVSGGEVHHSVLSPNVRIHSWSQVVDSILFDG-------------------VVVNRRARVYKAILDKNVVLTEN-STVGIDTEHDLAR---GFTVTPEGITV-----VPKGTVV 412          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_THEYD (Glucose-1-phosphate adenylyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   34 KNPASGMRVPTYLYDGYWEDIGTIEAFFNANLGIT-KKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 495
            KN   G++  +Y   GYW D+GTI A+F+A++ +  +KPI  F  Y++  PI+      PP K+LD ++ +S+I EG +I   KI +S +   S I +   I+D+L+M                     + I +NS + R I+DK   + +  KI
Sbjct:  243 KNEIPGIK--SYEERGYWRDVGTISAYFDAHMDMLGEKPI--FEIYNKMWPIHPARYEGPPVKILDGEIKNSIIAEGALIYGGKIENSFIRSGSIIEKDVEIKDSLIMD-------------------DVIIKRNSKLYRVIVDKKNVVYEGEKI 374          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRP7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain 70585) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA I D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEILDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGC_DECAR1.093e-1230.56Glucose-1-phosphate adenylyltransferase OS=Dechlor... [more]
GLGC_THELT1.427e-1226.74Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_RHOE41.427e-1229.14Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]
GLGC_CORJK1.427e-1228.32Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_RHOBA1.864e-1228.02Glucose-1-phosphate adenylyltransferase OS=Rhodopi... [more]
GLGC_NITMU1.864e-1225.29Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_BURP82.434e-1227.59Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]
GLGC_BIFAA2.434e-1224.86Glucose-1-phosphate adenylyltransferase OS=Bifidob... [more]
GLGC_THEYD3.179e-1231.61Glucose-1-phosphate adenylyltransferase OS=Thermod... [more]
GLGC_STRP73.179e-1232.28Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
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