EY702834

Overview
NameEY702834
Unique NameEY702834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRP4 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDGA-VKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_NOCFA (Glucose-1-phosphate adenylyltransferase OS=Nocardia farcinica GN=glgC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 46/168 (27.38%), Postives = 85/168 (50.60%), Query Frame = 1
Query:   79 GYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIK 576
            GYW D+GTI+AF++A++ +     P F+ Y++  PI      LPP+K     +  + ++G G ++    + +SV+     + +GA +E ++LM                     + IG+ + ++RAI+DKN  +G+   I V+ D  +E    ++G     G+VT+ K
Sbjct:  258 GYWRDVGTIDAFYDAHMDLVSVH-PVFNLYNKHWPIRGAAENLPPAKFAQGGLAQECIVGSGSILSAATVRNSVLSSNVVVDDGATVEGSVLMPG-------------------VRIGRGAVVRRAILDKNVVVGEGEIIGVDLDRDRERFAVSNG-----GVVTVGK 400          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRZT (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRZP (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRZJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain JJA) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRSV (Glucose-1-phosphate adenylyltransferase OS=Streptococcus sanguinis (strain SK36) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 49/157 (31.21%), Postives = 84/157 (53.50%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 513
            SG  V  Y + GYW+D+GT+E+ + AN+     P       +R   IY++    PP+ + + + V DS++ +GC +    + HS++   + + +GA+IED+++M                 G+V   IGK++ IKRAII + A I D V+I  ++ V
Sbjct:  229 SGESVYAYDFAGYWKDVGTVESLWEANMEYI-SPENALDSRNRRWKIYSRNLISPPNFISENSHVEDSLVVDGCFVDG-TVKHSILSTGAQVKKGAVIEDSVIM----------------SGAV---IGKDAKIKRAIIGEGAIISDGVEIDGTEEV 364          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRPN (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRPJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_STRPI (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   46 SGMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 516
            SG  V  Y + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  229 SGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY702834 vs. ExPASy Swiss-Prot
Match: GLGC_DESHY (Glucose-1-phosphate adenylyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 53/189 (28.04%), Postives = 95/189 (50.26%), Query Frame = 1
Query:   49 GMRVPTYLYDGYWEDIGTIEAFFNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDAL-IPSGTII 606
            G R+ +YL+ GYW D+GTIE+++NAN+ + ++   D  F++    +++    L P  + + A + +S+IG GC I   ++  SV+     + EG++IE ++L+  ++ YE               + + K    + AI+  + RIGD          +E     +G       +T+I D L IP GT+I
Sbjct:  231 GRRLYSYLFHGYWRDVGTIESYYNANMEVLQEERVD-KFFELKQRVFSNEEILAPQHLGERAKIHNSLIGNGCTILG-EVRDSVIASGVYVGEGSLIEQSILLPNSEIYE--------------DVRLHKTILGENAIVRAHCRIGDK---------REGNPPQEG-------ITVIGDHLHIPEGTVI 387          
The following BLAST results are available for this feature:
BLAST of EY702834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
GLGC_STRP43.179e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_NOCFA3.179e-1227.38Glucose-1-phosphate adenylyltransferase OS=Nocardi... [more]
GLGC_STRZT4.152e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZP4.152e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZJ4.152e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRSV4.152e-1231.21Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPN4.152e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPJ4.152e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPI4.152e-1231.65Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_DESHY4.152e-1228.04Glucose-1-phosphate adenylyltransferase OS=Desulfi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702834 ID=EY702834; Name=EY702834; organism=Citrus sinensis; type=EST; length=932bp
ACTGGTACCCTTCGGCCCGGTCCGGAATCCCACAAAAACCCCGCGTCCGG
GATGAGAGTGCCAACATATTTATATGATGGCTACTGGGAAGACATTGGAA
CAATTGAGGCTTTCTTCAACGCGAATCTGGGGATCACCAAAAAGCCAATT
CCGGATTTCAGCTTCTATGACCGGTCTGCTCCAATTTATACACAGCCTAG
ATATCTACCTCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAA
TTGGTGAAGGCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTT
GGGCTTCGATCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACT
TATGGGAGCAGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTG
CAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGA
GCAATAATTGACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAA
CAGTGACAGTGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCA
AGAGCGGGATTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACC
ATAATCTANACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCG
GGTACCTTCCCCTCTATGCTCGAGAATGTCGTAATCTCAAGTCTGCTTCC
ACTTTACCTTTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGT
GTAATGTAATTATGAGAGGAATATACGACCTGGAAAAAGGGACTGCTGTA
AAGGTCTAGTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCATCCAC
CTCCTTATCCCGGGGNATGGGACCTTGCCTTTTTTTGGGGAAATCCCCNT
TGGATTTGGTCCAAAAAAAAAAACANAAAAGA
back to top