EY649735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_METVA (30S ribosomal protein S4e OS=Methanococcus vannielii GN=rps4e PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.414e-27 Identity = 66/194 (34.02%), Postives = 107/194 (55.15%), Query Frame = 3 Query: 102 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 +G +KHLKRL AP +W L + F +PS GPH + LPL+LI+R+ LK A RE I+ +L+D R + +P G MDV+SIP+ NEN+ +L+D GR L + E+ KLCK+ + + G +N +DGR ++ + + K D++ + L + ++F+ G + +TGG++ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKERTFTVRPSPGPHSMDKSLPLLLIVRDTLKCADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKH 195
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_METM7 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps4e PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.150e-27 Identity = 67/194 (34.54%), Postives = 107/194 (55.15%), Query Frame = 3 Query: 102 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++ KLCK+ + + G +N +DGR + + + K D++ + + I + F G + VTGG++ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKTDAKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKH 195
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_METS3 (30S ribosomal protein S4e OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps4e PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.113e-27 Identity = 68/185 (36.76%), Postives = 101/185 (54.59%), Query Frame = 3 Query: 105 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 G +KHLK APK W + + KPS+G H L L L++R+ LK A RE I+ +VLVD +V D +P GFMD++ IPKT E +R+L D KGR +L+ I EE KLCK+ + + G +N +DG+ + + D I L + ++I E + G V++TGG++ Sbjct: 5 GSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKH 187
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_METM6 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps4e PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.113e-27 Identity = 66/194 (34.02%), Postives = 107/194 (55.15%), Query Frame = 3 Query: 102 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++ KLCK+ + + G +N +DGR + + + K D++ + + I + F G + +TGG++ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDILKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKTDAKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYITGGKH 195
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_PYRFU (30S ribosomal protein S4e OS=Pyrococcus furiosus GN=rps4e PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27 Identity = 70/190 (36.84%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 102 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 +G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T RE IL + LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA K ++R+ + + +N +DG +I D + T+ + + +I E + F+ G V VT G+N Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKRMIKGARVQLNFHDGTNHIVSIAEKDNYF-TSYTVLMKVPEREILEVLPFEKGAYVFVTQGKN 192
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_KORCO (30S ribosomal protein S4e OS=Korarchaeum cryptofilum (strain OPF8) GN=rps4e PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.164e-27 Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 3 Query: 105 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 656 G +HLK L AP ++ + K + KPS GPH E +PL+LI+R+ LK A T RE I+ + +LVD K R D + G MDV+SIP+ N+R++ D RL I E+K KL KV + + G + ++DGR +K D++ ++L + + + ++FD G+ V+VT GR Sbjct: 5 GGSRHLKSLAAPGYYPIAKRERVWVVKPSPGPHAIDEGIPLLLIVRDMLKLATTAREARRIISMKKILVDGKPRYDYKFQVGLMDVISIPEIGVNYRMVPDPHRFLRLIEIPQSESKMKLVKVIGKRTIRGGRIQLTSHDGRNFLLDGRDVKPGDSLLIELPSQSVIDHLRFDTGSSVLVTRGR 188
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_AERPE (30S ribosomal protein S4e OS=Aeropyrum pernix GN=rps4e PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.197e-26 Identity = 73/197 (37.06%), Postives = 107/197 (54.31%), Query Frame = 3 Query: 96 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI--RYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 MAR G ++ LK L AP+ W + + +A KP GPH + + LPL+LI+RN L YA T RE ++ + H VD VR D +P GFMDV+ + T E FR+L F+LH I +EE K ++ + + G +N +DGR I R DP + + DT+ + + +I IKF G + ++ GGRN Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRN 197
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_METMP (30S ribosomal protein S4e OS=Methanococcus maripaludis GN=rps4e PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.666e-26 Identity = 64/194 (32.99%), Postives = 105/194 (54.12%), Query Frame = 3 Query: 102 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 659 +G +KHLKRL AP +W L + F +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +E + +L+D GR L + ++ KLCK+ + + G +N +DGR + + + K D++ + + I + F G + +TGG++ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLK--KTDKTDVKLCKIVNKTVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKH 195
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_ARCFU (30S ribosomal protein S4e OS=Archaeoglobus fulgidus GN=rps4e PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.758e-26 Identity = 66/195 (33.85%), Postives = 114/195 (58.46%), Query Frame = 3 Query: 108 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRDVLESLRTEK 692 ++ H KRL+APK + + + + KPS GPH ++E +PL++++R+ L+ A T RE I+ +LVD VR D +P G DVV+IPK +++R+L+D KGR+ + E+A KL K+ + + G +N +DG I + K D+I L + ++ + +KF+ G +VM+TGG + + +++ K Sbjct: 2 IELHQKRLSAPKTYKIPRKVSKWVVKPSPGPH-NKEAIPLLVLVRDFLELADTGREARRIISAGEILVDGVVRKDYKFPVGLFDVVTIPKLEKSYRILFDEKGRYIPKEV--EDADLKLYKITNKTLVRGGKVQLNLFDGTNILGSND-YKTKDSILLRIPEKEVVDHLKFEEGALVMITGGTHAGEIGRIKSYK 192
BLAST of EY649735 vs. ExPASy Swiss-Prot
Match: RS4E_DESK1 (30S ribosomal protein S4e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps4e PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.259e-24 Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 105 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLETNKITEFIKFDVGNVVMVTGGRN 659 G +HLK +NAP++W + + + K S GPH LPL++++R+ L YA T +E ++ + + +D +VR D +P G MDV+ I N+ +R++ L I EEA FKLC++ + + G +N +DGR IR DP DT +KL + +I +++ G + +V+GGRN Sbjct: 5 GGSRHLKAINAPRYWPILRKEYRWVVKSSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGVNKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRN 197 The following BLAST results are available for this feature:
BLAST of EY649735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649735 ID=EY649735; Name=EY649735; organism=Citrus sinensis; type=EST; length=871bpback to top |