EY702831

Overview
NameEY702831
Unique NameEY702831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1516 contig Csv1_Contig1516:22..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A2_PICST (40S ribosomal protein S1-B OS=Pichia stipitis GN=RPS1B PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.577e-71
Identity = 133/218 (61.01%), Postives = 173/218 (79.36%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDXGVKVD 787
            DW+DIKAPS F  RNVGKTL+ R+ G K A++GLK RV EVSL DL   E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR  NQ+K+T YAQ+S++R++R+KM EIM  + ++  L  L  K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV+
Sbjct:   28 DWFDIKAPSTFENRNVGKTLINRSTGLKNAADGLKGRVVEVSLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGALLALHGEGSTEEKGKKVN 245          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJY (40S ribosomal protein S1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.059e-71
Identity = 133/216 (61.57%), Postives = 167/216 (77.31%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDXGVKV 784
            DWYDIKAPS F V+NVGKTLV RT G K A++ LK R+ EVSL DL  +EEH++RK++LR +DVQGK  LT F GM+ T+DKLRSLVRKW T IEA   +KTTD +  R+F IGFT+R  NQ+K+T YAQ+SQIR IR+KM +++  QA  C ++ LV+K I E+IGREIEKAT  I+PLQNVF+RKVKILK+PK D  KL+E HG+ ++D G KV
Sbjct:   28 DWYDIKAPSFFEVKNVGKTLVNRTAGLKNANDALKGRIVEVSLADLQKDEEHSFRKVKLRVDDVQGKACLTTFNGMSMTSDKLRSLVRKWQTTIEADQTIKTTDGYVCRIFVIGFTRRRYNQIKKTTYAQSSQIRAIRQKMFQVIQNQATGCSMRELVQKLIPEIIGREIEKATGGIFPLQNVFVRKVKILKSPKLDAQKLLEQHGE-AQDVGTKV 242          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A_PICGU (40S ribosomal protein S1 OS=Pichia guilliermondii GN=RPS1 PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.513e-71
Identity = 132/217 (60.83%), Postives = 172/217 (79.26%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDXGVKV 784
            +W+DIKAP+ F  R VGKTL+ ++ G K A++GLK RV EV+L DL   E+HAYRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR PNQVK+T YAQ+S++R+IR+KM EIM  + ++  L  L +K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG LM +HG+  SE+ G KV
Sbjct:   28 EWFDIKAPTTFENRAVGKTLINKSTGLKNAADGLKGRVIEVNLADLQGSEDHAYRKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTADDYYLRVFAIAFTKRQPNQVKKTTYAQSSKLREIRKKMMEIMQREVSNSTLAQLTQKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGNLMSLHGEGASEEKGKKV 244          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A1_SCHPO (40S ribosomal protein S1-A OS=Schizosaccharomyces pombe GN=rps101 PE=2 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 3.513e-71
Identity = 134/216 (62.04%), Postives = 168/216 (77.78%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDXGVKV 784
            DWYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL  +EEH++RK++LR ED+QGK+ LT+F G + T+DKLRSLVRKW + IEA   +KTTD +  R+F IGFT R  NQVK+T YAQ+SQIR I +KM +++  QA  C +K LV+K I EVIGR IEKAT++IYPLQNVF+RKVKILKAPK D  KL+E+HG+ S+D G KV
Sbjct:   28 DWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 242          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A_MALGO (40S ribosomal protein S1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.588e-71
Identity = 131/220 (59.55%), Postives = 170/220 (77.27%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----EDXGVKV 784
            +WYDIKAP  F  RNVGKT+V R+QG K AS+ LK R+ E SL DL  ++E AYRK +LR ++VQG+N LTNF+GM+FT+DKLRSLVRKW +LIEA+ D++TTD + LR+F IGFT+R  NQVK+T YA++SQI  IR+KM E++  +++SCDL+  V K I EV+GREIEK+T  IYPL++VFI KVK+LK PKFD+ KL E+HG  S    ED G K+
Sbjct:   27 EWYDIKAPVFFENRNVGKTIVNRSQGLKNASDALKGRILEQSLADLNKDDEQAYRKFQLRVDEVQGRNCLTNFYGMSFTSDKLRSLVRKWQSLIEAHQDIRTTDGYLLRVFAIGFTRRRANQVKKTTYAKSSQIHAIRKKMFEVIQRESSSCDLREFVAKLIPEVMGREIEKSTQGIYPLKDVFIHKVKVLKRPKFDVNKLYELHGGASVVGAEDVGTKI 246          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.335e-70
Identity = 137/224 (61.16%), Postives = 170/224 (75.89%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDXGVKVDRPAD 799
            +WYDIKAPS F V+++GKTLV RTQGTKIASEGLK RV+EVSLGDL N  E  +RK+RL  EDVQG+  LTNF GM  T DKL S+V+KWHTLIEA V VKT+D + LRLFCIGFTK+   Q+K+T YA++S+IRQIR KM E M  +    DLK +  K + + IG++IEKA S IYPLQ+V IRKVKILK PKF++G+LME+H D   ++   G K++RP D
Sbjct:   26 EWYDIKAPSMFNVQHIGKTLVNRTQGTKIASEGLKGRVYEVSLGDL-NNAESEFRKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIGFTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDD 248          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A_BABBO (40S ribosomal protein S3a OS=Babesia bovis GN=BBOV_III001480 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.335e-70
Identity = 132/238 (55.46%), Postives = 177/238 (74.37%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDXGVKVDRPADEPHAEAPLX*VELDVNE 850
            +WY +KAP  F VRN G+TLV++TQGTK+A++GL+ R++EVSL DL  +E+ +YRKI+L  ED+QG+N LTNF G + T DKL SL+RK ++LIEA+ DVKTTD +TLR+FCIG+TKR P Q+K TCY ++S+ R +RRKM E+M  +A++  ++ +V+K I E IG+EIEKA  S++PLQNV IRK+K+LK PKFDL KLMEVH D SE+ G       +E    A L   ELD  E
Sbjct:   28 EWYTLKAPVMFHVRNFGQTLVSKTQGTKLATDGLRGRIYEVSLADLNADEDQSYRKIKLCCEDIQGRNCLTNFHGTSVTRDKLCSLIRKNYSLIEAFTDVKTTDGYTLRMFCIGYTKRRPGQLKSTCYIRSSRTRVVRRKMIEVMQREASTTSMREVVKKIIPESIGKEIEKACKSVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDISEETGHAT--KVEESEEAANLLTKELDAQE 263          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.335e-70
Identity = 131/217 (60.37%), Postives = 170/217 (78.34%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDXGVKV 784
            +W+DIKAPS F  RNVGKTL+ ++ G K A++GLK RVFEV L DL   E+H+YRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR  NQVK+T YAQ+S++R++R+KM EIM  + ++  L  L  K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct:   28 EWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.335e-70
Identity = 131/217 (60.37%), Postives = 170/217 (78.34%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDXGVKV 784
            +W+DIKAPS F  RNVGKTL+ ++ G K A++GLK RVFEV L DL   E+H+YRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR  NQVK+T YAQ+S++R++R+KM EIM  + ++  L  L  K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct:   28 EWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244          
BLAST of EY702831 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.743e-70
Identity = 136/226 (60.18%), Postives = 172/226 (76.11%), Query Frame = 2
Query:  137 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDXGVKVDR 790
            +WYD+KAPS F VR +GKTLVTR+QGTKIAS+ LK RVFEVSL DL N+E   +RK +L AE+VQG+NVLTNF GM+ T DKL S+V+KW TLIEA VDVKTTD + LR+F IGFTK+  NQVK+TCYAQ +Q++ IR+KM EI+  + +S D+K +V K I + IG++IEK+   IYPL +V I KVK+LK PKFD+GKLME+HG+ S         + G KVDR
Sbjct:   29 EWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDEV-TFRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDR 253          
The following BLAST results are available for this feature:
BLAST of EY702831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
RS3A2_PICST1.577e-7161.0140S ribosomal protein S1-B OS=Pichia stipitis GN=R... [more]
RS3A_SCHJY2.059e-7161.5740S ribosomal protein S1 OS=Schizosaccharomyces ja... [more]
RS3A_PICGU3.513e-7160.8340S ribosomal protein S1 OS=Pichia guilliermondii ... [more]
RS3A1_SCHPO3.513e-7162.0440S ribosomal protein S1-A OS=Schizosaccharomyces ... [more]
RS3A_MALGO4.588e-7159.5540S ribosomal protein S1 OS=Malassezia globosa (st... [more]
RS3A_BRUMA1.335e-7061.1640S ribosomal protein S3a OS=Brugia malayi GN=Bm1_... [more]
RS3A_BABBO1.335e-7055.4640S ribosomal protein S3a OS=Babesia bovis GN=BBOV... [more]
RS3A2_CLAL41.335e-7060.3740S ribosomal protein S1-B OS=Clavispora lusitania... [more]
RS3A1_CLAL41.335e-7060.3740S ribosomal protein S1-A OS=Clavispora lusitania... [more]
RS3A_APLCA1.743e-7060.1840S ribosomal protein S3a OS=Aplysia californica G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702831 ID=EY702831; Name=EY702831; organism=Citrus sinensis; type=EST; length=863bp
ACGAGCTATGACTAGGTAGCAGCGGAGCCGTCTCTTGAGCAGCAGCTGCA
CAAACATGGCTGTCGGGAAGAACAAGAGGATTTCAAAGGGGAAGAAAGGA
GGCAAGAAGAAGGCTGCTGATCCGTTTGCCAAGAAGGACTGGTATGATAT
CAAGGCTCCATCTTGTTTCCGCGTCAGAAATGTTGGCAAGACTCTTGTTA
CCCGGACTCAGGGTACCAAGATTGCATCAGAAGGTCTCAAGCACAGAGTG
TTTGAGGTATCACTAGGTGATCTTCTCAATGAAGAAGAGCATGCTTACAG
GAAGATCAGACTGAGAGCTGAAGATGTCCAAGGGAAGAATGTTTTGACTA
ACTTCTGGGGCATGAATTTCACTACAGACAAGCTGAGGTCTTTGGTTAGG
AAGTGGCATACCTTGATTGAAGCTTACGTGGATGTCAAGACCACTGATAA
CTTCACATTGAGGTTGTTCTGCATTGGATTCACCAAGAGACTTCCAAACC
AGGTTAAGAGGACTTGCTACGCACAGACCAGCCAGATTAGACAGATTCGC
CGCAAGATGAGGGAGATCATGGTTGCTCAGGCAGCATCTTGTGATCTTAA
GAGCTTGGTCGAAAAGTTCATTGCTGAAGTGATTGGAAGAGAGATTGAGA
AGGCAACGTCAAGCATATACCCCTTACAAAATGTGTTCATTCGCAAAGTG
AAGATCCTGAAAGCTCCCAAGTTTGATCTTGGAAAATTGATGGAGGTTCA
CGGTGATTACTCGGAAGATGNTGGTGTGAAGGTGGATAGGCCAGCTGATG
AGCCCCATGCTGAAGCACCACTGNAGTGAGTGGAGCTTGACGTGAATGAG
AAANTTTTCTAGT
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