EY702829

Overview
NameEY702829
Unique NameEY702829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702829 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 55/204 (26.96%), Postives = 94/204 (46.08%), Query Frame = 2
Query:  116 LKCAIQLGIPDIISKHGKP--MTLNELVSAL-TINPSKSRCVYRLMRILIHTGFFAQQKLISSGNNNDEEQGYVLTNASKLLLK-DNPLSVTPFLQAMLDPILLSPWQQLRTWFQNDDPTPFDTAHGKTLWEYAGDEPKLNNFFNEAMASDALLATSVMIHKCKDVFEGLNSLVDVXXXXXXXXXXXXXXFPKVECTCFDLPHV 715
            L  AI+L + +I+++ G    +T  E+ S L T NP     + R+ R+L    +      +        E+ Y L    K L+K ++ +S+ P      D + L  W  ++     +   PF  AHG T ++Y G +P+ N  FN AM+  + +    ++ +  + FEGL ++VDV              +P ++   FDLPHV
Sbjct:   18 LTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLL--ASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAIL-EGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKIL-ETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHV 217          
BLAST of EY702829 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 58/215 (26.98%), Postives = 92/215 (42.79%), Query Frame = 2
Query:   95 NFINSMTLKCAIQLGIPDIISKHGKP---MTLNELVSALTINPSKSRCVYRLMRILIHTGFFAQQKLISSGNNNDEEQG----YVLTNASKLLLKDNPLS-VTPFLQAMLDPILLSPWQQLRTWFQNDDPTPFDTAHGKTLWEYAGDEPKLNNFFNEAMASDALLATSVMIHKCKDVFEGLNSLVDVXXXXXXXXXXXXXXFPKVECTCFDLPHV 715
            N +    L  AI L + +II+K   P   M+ +E+ S L  +   S    RL R+L      A   +++S     E+ G    Y L+   K L+ D     +  F   +  P LL  W   +    ++D   F   HG T +E+ G + K+N  FN++M  D        + +    FEG+++LVDV              +P ++   FDLP V
Sbjct:   34 NLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRML---RLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMV-DVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQV 244          
The following BLAST results are available for this feature:
BLAST of EY702829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
COMT1_EUCGL5.553e-1126.96Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
CHOMT_MEDSA5.553e-1126.98Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702829 ID=EY702829; Name=EY702829; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGCCTAGTGAAGATGAATTTGATCGATGGAGATCATGATA
CTGAGCTACTTGAAGCTCAAACTCATGTTTGGAATCACATTTTTAATTTC
ATAAACTCCATGACGCTTAAATGCGCTATTCAATTAGGCATCCCAGATAT
TATCAGCAAACATGGCAAACCCATGACCCTCAATGAGCTTGTTAGTGCCC
TAACAATAAACCCATCAAAATCCCGATGTGTGTATCGCTTGATGCGCATT
CTGATCCACACAGGCTTCTTTGCGCAGCAAAAGCTAATTAGCAGCGGAAA
TAATAATGACGAAGAACAAGGCTATGTTCTAACAAATGCTTCTAAACTTC
TCCTAAAAGACAACCCCTTAAGCGTGACACCTTTCTTGCAAGCCATGCTA
GATCCTATTTTGCTATCACCGTGGCAGCAACTGAGAACTTGGTTTCAAAA
CGATGACCCGACGCCGTTTGATACAGCACATGGGAAGACTCTTTGGGAGT
ATGCTGGGGACGAGCCAAAACTTAACAATTTTTTCAATGAAGCCATGGCA
AGTGATGCTTTGTTGGCAACAAGCGTGATGATACATAAGTGTAAGGATGT
GTTTGAAGGTTTGAATTCNTTGGTGGATGTGGGCGGGGGCATAGGAACCG
CGGCCAAGGCCATAGCTAAAGCGTTTCCCAAAGTGGAGTGCACTTGTTTT
GATCTGCCACATGTGGNTAATGGCCTCGACAGCGATTTGCCCATCTCAAT
ATNGTGGAGGGGACATGTTGAGGCATTTCCCCAGCTGACGCTGTTCTACT
CAGTGGATATACATGACTGGACGATGAAGATGCGTGAAGATCTTAGAATG
TAGGGAGCATCACAGCGATGGAAGAAAAGGAAGGG
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