EY702828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINK 395 GG G AKTT + +SRSS+AG+QFPVGRI R+LK+ A RVGA A VYL+++LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+I + L+ K Sbjct: 6 GGGGRGKAKTT-----------KAVSRSSKAGLQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPK 122
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A5_WHEAT (Protein H2A.5 OS=Triticum aestivum GN=H2A-2 PE=2 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 60 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 395 K D+K+ ++RS +AG+QFPVGRI R+LK A RVG+ A VYLA++LEYL AEVLELAGNA+KD K RI PRHL LA+R D+EL L+ G TIA GGVIP+I+ L+ K Sbjct: 5 KGGDRKKAVTRSVKAGLQFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPK 116
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A4_RAT (Histone H2A type 4 OS=Rattus norvegicus PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 70/127 (55.12%), Postives = 90/127 (70.87%), Query Frame = 3 Query: 27 LAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 404 ++ + G K + K K SRS RAG+QFPVGR+HR L+ A R+GA VYLA++LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ + TIA GGV+P+I L+ K T+ Sbjct: 1 MSGRAKQGGKARAKAK----SRSFRAGLQFPVGRVHRLLRQGNYAE-RIGAGTPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A3_LYTPI (Histone H2A, sperm (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 3 Query: 87 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTT 401 SRSSRAG+QFPVGR+HR L+ A RVGA A VYLA++ EYL AE+LELAGNA+ D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T Sbjct: 3 SRSSRAGLQFPVGRVHRFLRKGNYAQ-RVGAGAPVYLAAVFEYLAAEILELAGNAAPDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 107
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 3 Query: 75 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 395 K SRS++AG+ FPVGRIHR L+ A RVG+ A VYL S+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+IH++L+ K Sbjct: 12 KASTSRSAKAGLTFPVGRIHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPK 118
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A1_WHEAT (Histone H2A.1 OS=Triticum aestivum GN=H2A-9 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 60 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 395 K D+K+ ++RS +AG+QFPVGRI R+LK A RVG+ A VYLA++LEYL AEVLELAGNA+KD K RI PRHL LA+R D+EL L+ G TIA GGVIP+I+ L+ K Sbjct: 5 KGGDRKKAVTRSVKAGLQFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPK 116
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.103e-27 Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 75 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 395 K+ SRSS+AG+QFPVGRI R LK+ A RVGA A VYLA++LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K Sbjct: 14 KKSTSRSSKAGLQFPVGRIARFLKNGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPK 120
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 73/136 (53.68%), Postives = 91/136 (66.91%), Query Frame = 3 Query: 3 TRPGGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKD 407 T GGKG K A + +K+ +SRS +AG+QFPVGRI R+LK A VG A VYLA++LEYL AEVLELAGNA++D K RI PRH+ LAIR DEEL L+ G TIA GGV+P+I+ L+ K T + Sbjct: 6 TGAGGKG----KKGAAGRKVGGPRKKSVSRSVKAGLQFPVGRIGRYLKKGRYAQX-VGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAE 136
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3 Query: 15 GKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKD 407 G G K AG K +K+ +SRS +AG+QFPVGRI R+LK A R+G A VYLA++LEYL AEVLELAGNA++D K RI PRH+ LAIR DEEL L+ G TIA GGV+P+I+ L+ K T + Sbjct: 7 GAGGKLKKGAAGRK-AGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAE 136
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3 Query: 15 GKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKD 407 G G K AG K +K+ +SRS +AG+QFPVGRI R+LK A R+G A VYLA++LEYL AEVLELAGNA++D K RI PRH+ LAIR DEEL L+ G TIA GGV+P+I+ L+ K T + Sbjct: 7 GAGGKLKKGAAGRK-AGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAE 136 The following BLAST results are available for this feature:
BLAST of EY702828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702828 ID=EY702828; Name=EY702828; organism=Citrus sinensis; type=EST; length=738bpback to top |