EY702828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A_EUGGR (Histone H2A OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 404 GGK AK AG K K K +S +AG+ FPVGR L++ A RVG A VYLA++LEYL+AE+LELAGNAS+D K KRITPR L LA+R DEEL+ L+ G TIA GGV+P+I + L+ K K Sbjct: 11 GGKDKKGAK--AGVK---KGKTGGSGQSKKAGLTFPVGRTGSLLRAGRYAK-RVGKGAPVYLAAVLEYLSAELLELAGNASRDNKKKRITPRFLTLAVRNDEELNKLLSGVTIASGGVLPNIQQVLLKKKGK 136
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A3_STRPU (Histone H2A-beta, sperm (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 58/89 (65.17%), Postives = 69/89 (77.53%), Query Frame = 3 Query: 66 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTL 332 K K + RSSRAG+QFPVGR+HR L+ A+ RVGA A VYLA++LEYL AE+LELAGNA++D K RI PRHLQLAIR DEEL+ L Sbjct: 1 KAKGKAKRRSSRAGLQFPVGRVHRFLRKGNYAN-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKL 88
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_DICDI (Histone H2A.z OS=Dictyostelium discoideum GN=H2AZ PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3 Query: 60 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLEL----AGNASKDL-KVKRITPRHLQLAIRGDEELDTLIK--GTIAGGGVIPHIHKSL 386 K + +P+ +S++AG+ FPVGRIHR LK+++ RV ++VYLA+ILEYL +EVLEL SK+ V+RI+PRHL LAI+ DEELD LI+ TIAGGGVIP+IH+ L Sbjct: 10 KVNKRVKPVPKSTKAGLIFPVGRIHRMLKNKVPLK-RVSILSSVYLAAILEYLASEVLELTISQVSIQSKEYHNVRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL 124
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A_TRYCR (Histone H2A OS=Trypanosoma cruzi PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 54/115 (46.96%), Postives = 79/115 (68.70%), Query Frame = 3 Query: 60 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKD--LKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 395 K KKR RS++AG+ FPVGR+ L+ A R+GA+ AVY+A++LEYLTAE+LEL+ A+ K KR+TPR + LA+R D++L L+K T++ GGV+P ++K+L K Sbjct: 9 KKASKKRSGGRSAKAGLIFPVGRVGSLLRRGQYAR-RIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKRLTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A2_XENLA (Histone H2A type 2 OS=Xenopus laevis PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18 Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 27 LAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 404 ++ + G K + K K +RSSRAG+QFPVGR+HR L+ A RVGA A VYLA++LEYLTAE+LELA ++ + + ++ DEEL+ L+ G TIA GGV+P+I L+ K T+ Sbjct: 1 MSGRGKQGGKTRAKSK----TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAWERLPEITKRPVLSPGTCNSLCNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKTE 122
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AX_DICDI (Histone H2A.x OS=Dictyostelium discoideum GN=H2AX PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.849e-17 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 72 KKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 404 K +P SRS+RAGI FPV R+ R L+ A RV +TA VYLA++LEYL E+LELA N K RITP+H+ A+ D EL++L + TIA GGV+P +S K K Sbjct: 31 KSKPESRSARAGITFPVSRVDRLLREGRFAP-RVESTAPVYLAAVLEYLVFEILELAHNTCSISKKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKKKK 141
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AY_TETTH (Histone H2A.Y OS=Tetrahymena thermophila GN=HTAY PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 87 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTI--AGGGVIPHIHKSLINKTTK 404 S S ++G+ FP GR+ R+LK + RV ++ +YLA +LEYL AEVLE AGN +K+ ++ RI P H++ A R D EL+ + GTI GG + +INK+ K Sbjct: 282 STSQKSGLVFPCGRLRRYLK-QACKQFRVSSSCNIYLAGVLEYLAAEVLETAGNIAKNNRLSRINPVHIREAFRNDAELNQFVNGTIIAEGGSTSTNFVLPIINKSKK 388
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A2_LILLO (Histone H2A.2 OS=Lilium longiflorum GN=gH2A PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 39 TTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSL 386 ++A NK +++ RS +A +QF V R+ LK R+GATA VYLA++LE L AEVLE+A N ++ K I PRH+ LA+R D E++ L G TI+ GV+P K L Sbjct: 3 SSANNKGAGTSRRK--LRSEKAALQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLEMAANVTEKHKRIVIKPRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKEL 116
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV1_DICDI (Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.025e-15 Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 39 TTAGNKDKDKDKKRPI--------SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 404 TT N +K +K++ + SRS+RA + FPV RI + ++ R + A V+LA++LEYLT E+LEL+ + RITP+H+ L+I D EL+ L+K TIA GGV IH L++ K Sbjct: 108 TTKKNNEKSNEKQKSVKFANKINESRSARADLTFPVSRIEKMIREGRFTK-RCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILLDTPKK 237
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2A1_LEIIN (Histone H2A.1 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.025e-15 Identity = 46/106 (43.40%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 87 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVK--RITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 395 S+S++ G+ FPVGR+ ++ A R+GA+ AVYLA++LEYLTAE+LEL+ A+ K R+ PR + LA R D+++ TL+K T++ GV+P+I K++ K Sbjct: 16 SKSAKCGLIFPVGRVGGMMRRGQYAR-RIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPNISKAMAKK 120 The following BLAST results are available for this feature:
BLAST of EY702828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702828 ID=EY702828; Name=EY702828; organism=Citrus sinensis; type=EST; length=738bpback to top |