EY702828

Overview
NameEY702828
Unique NameEY702828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1901 contig Csv1_Contig1901:398..1136. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_LODEL (Histone H2A.Z OS=Lodderomyces elongisporus GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37
Identity = 82/130 (63.08%), Postives = 97/130 (74.62%), Query Frame = 3
Query:   15 GKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 404
            GKG    K   G     +  K   S S+RAG+QFPVGR+ R+LK +     RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K  K
Sbjct:    3 GKG----KVHGGKGKSSEIAKSSTSHSARAGLQFPVGRVKRYLKKQAQNKIRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_NEUCR (Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.459e-37
Identity = 81/129 (62.79%), Postives = 99/129 (76.74%), Query Frame = 3
Query:   12 GGKGLLAAKTTAGNKDKDKD-KKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395
            GGKG  +   ++G K    +  K+  S S+RAG+QFP GR+ R LK       RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:    3 GGKGKSSGGKSSGGKTSGVEGPKKQQSHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_CANAL (Histone H2A.Z OS=Candida albicans GN=HTZ1 PE=3 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 3
Query:   15 GKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 404
            GKG    K   G     +  K   S S+RAG+QFPVGR+ R+LK       RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K  K
Sbjct:    3 GKG----KVHGGKGKSSEIAKSSTSHSARAGLQFPVGRVKRYLKRNAQNKIRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36
Identity = 82/128 (64.06%), Postives = 98/128 (76.56%), Query Frame = 3
Query:   12 GGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395
            GGKG        G K     +    S SSRAG+QFPVGRI R++K  +    RVGA AA+Y+A++LEYLTAEVLELAGNA++DLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+K+L+ K
Sbjct:   13 GGKG-------KGGKASAAVEGAQQSHSSRAGLQFPVGRIKRYMKKSVQNKVRVGAKAAIYIAAVLEYLTAEVLELAGNAARDLKVKRITPRHLQLAIRGDEELDTLIQATIAYGGVMPHINKALLLK 133          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_DEBHA (Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=3 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36
Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 3
Query:   15 GKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 404
            GKG    K   G     +  K   S S+RAG+QFPVGRI R+LK       RVG+ +A+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K  K
Sbjct:    3 GKG----KVHGGKGKSSETAKSTTSHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAFGGVLPHINKALLLKVEK 128          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36
Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 3
Query:   15 GKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 404
            GKG    K   G     +  K   S S+RAG+QFPVGRI R+LK       RVG+ +A+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K  K
Sbjct:    3 GKG----KVHGGKGKSSEAAKSSTSHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_MONAN (Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36
Identity = 81/129 (62.79%), Postives = 97/129 (75.19%), Query Frame = 3
Query:    9 PGGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395
            PGGKG    K+  G  D     K   S S++AG+QFP GR+ R LK+      RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:    2 PGGKG----KSIGGKGDPKGSGKAQKSHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 126          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_COCIM (Histone H2A.Z OS=Coccidioides immitis GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 83/130 (63.85%), Postives = 98/130 (75.38%), Query Frame = 3
Query:    9 PGGKGLLAAKTTAGN-KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395
            PGGKG    K+  G    KD   K   S S++AG+QFP GRI R LK+      RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:    2 PGGKG----KSVGGKGAPKDASGKTQRSHSAKAGLQFPCGRIKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_EMENI (Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 3
Query:    9 PGGKGLLAAKTTAGNK-DKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395
            PGGKG    K+  G    KD   K   S S++AG+QFP GR+ R LK+      RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:    2 PGGKG----KSIGGKAGSKDSAGKAQKSHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127          
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPOR (Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 3
Query:    9 PGGKGLLAAKTTAGNK-DKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395
            PGGKG    K+  G    KD   K   S S++AG+QFP GR+ R LK+      RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:    2 PGGKG----KSIGGKAGSKDSAGKAQKSHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127          
The following BLAST results are available for this feature:
BLAST of EY702828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
H2AZ_LODEL5.711e-3763.08Histone H2A.Z OS=Lodderomyces elongisporus GN=HTZ1... [more]
H2AZ_NEUCR7.459e-3762.79Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 S... [more]
H2AZ_CANAL9.742e-3763.08Histone H2A.Z OS=Candida albicans GN=HTZ1 PE=3 SV=... [more]
H2AZ_YARLI1.272e-3664.06Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 ... [more]
H2AZ_DEBHA1.272e-3663.08Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=... [more]
H2AZ_PICST1.662e-3663.08Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2[more]
H2AZ_MONAN2.170e-3662.79Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1[more]
H2AZ_COCIM3.702e-3663.85Histone H2A.Z OS=Coccidioides immitis GN=HTZ1 PE=3... [more]
H2AZ_EMENI6.315e-3663.08Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 ... [more]
H2AZ_ASPOR6.315e-3663.08Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-G04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702828 ID=EY702828; Name=EY702828; organism=Citrus sinensis; type=EST; length=738bp
CCACGCGTCCGGGAGGGAAGGGTCTTTTAGCGGCGAAAACCACGGCTGGT
AACAAGGATAAGGACAAGGATAAGAAAAGGCCAATTTCCAGGTCATCTCG
TGCCGGTATCCAGTTTCCTGTGGGTCGCATTCACCGCCACCTCAAGTCAA
GGATTGCTGCCCATGGACGTGTTGGGGCCACTGCTGCTGTTTATTTGGCT
TCAATCCTTGAATACCTGACTGCTGAGGTTCTTGAGCTGGCTGGGAATGC
AAGCAAGGATCTGAAGGTGAAGAGAATTACGCCAAGGCATCTGCAGCTTG
CTATTAGAGGAGATGAAGAGCTGGACACTCTCATCAAGGGGACCATTGCT
GGAGGTGGTGTGATCCCTCACATTCACAAATCACTTATCAACAAAACTAC
CAAAGATTGAGTTCTTTGCGTGGTTTTGAATCGCTCTCTAGTGATGACTT
TGGTTTTATGTGTTACTGTTTTCCAGTTAGGGTAATCTTGGACTCATTTT
GTGTTTTTTAGTAGGTTGTCTAGAATATCTTGGTTAGTACATATGGCTTG
ACTCTTAGGTTTGTCCTCTGGATCTATATACTCATGTTTGGAGTAGGAAT
GTTGTTCGTTATGCACTATTATCTGTCTGTATCTGTTTCTTTCTGGCACT
GGTTCCAATTCATGTTCTCTCCTGCTTTGCTTCCCTGACATGATATGAAA
GCAGCCATCATCTGTGTTTCTTTAAAAAAAAAAAAAAA
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