EY649716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_RAT (High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.833e-13 Identity = 40/104 (38.46%), Postives = 53/104 (50.96%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + +EDD+E+ Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEED 193
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_MOUSE (High mobility group protein B1 OS=Mus musculus GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.833e-13 Identity = 40/104 (38.46%), Postives = 53/104 (50.96%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + +EDD+E+ Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEED 193
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_CRIGR (High mobility group protein B1 (Fragment) OS=Cricetulus griseus GN=HMGB1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.833e-13 Identity = 40/104 (38.46%), Postives = 53/104 (50.96%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + +EDD+E+ Sbjct: 56 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEED 158
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB2_PIG (High mobility group protein B2 OS=Sus scrofa GN=HMGB2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13 Identity = 42/104 (40.38%), Postives = 53/104 (50.96%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y R + +G N+ +D+EE Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAY-RAKGKGEAGKKGPGRPTGSKKKNEPEDEEE 192
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_CHICK (High mobility group protein B1 OS=Gallus gallus GN=HMGB1 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNY-NRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+ +K PY KA K K +YEKD+ +Y ++ + +G K V +ED++EE Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK---GAATKAARKKVEEEDEEEE 188
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB2_HUMAN (High mobility group protein B2 OS=Homo sapiens GN=HMGB2 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 42/106 (39.62%), Postives = 52/106 (49.06%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNR--RQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + G K DE+++EE Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEE 195
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB2_BOVIN (High mobility group protein B2 OS=Bos taurus GN=HMGB2 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 42/106 (39.62%), Postives = 52/106 (49.06%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNR--RQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E R + K +HP S+ K GE W S DK PY KA K K +YEKD+ Y + G K DE+++EE Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEE 195
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_PAPAN (High mobility group protein B1 OS=Papio anubis GN=HMGB1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR-QAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + + + K +ED+++E Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 194
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_MACFA (High mobility group protein B1 OS=Macaca fascicularis GN=HMGB1 PE=2 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR-QAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + + + K +ED+++E Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 194
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB1_HUMAN (High mobility group protein B1 OS=Homo sapiens GN=HMGB1 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR-QAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + + + K +ED+++E Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 194 The following BLAST results are available for this feature:
BLAST of EY649716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649716 ID=EY649716; Name=EY649716; organism=Citrus sinensis; type=EST; length=945bpback to top |