EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5044 contig Csv1_Contig5044:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.496e-64
Identity = 124/182 (68.13%), Postives = 145/182 (79.67%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA P+   YRLIDIP SNC+N  I KIYVLTQFNSASLNRH++R Y  N  G+ NE FVEVLAAQQ+PENP+WF GTADAV QYLWL EE +V E+L L+GDHLYRMDY +FIQ HR+T ADITLS +P+D++ A+ F  MKID+ GR I FS+  +
Sbjct:    2 KKVLSIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFTGF-NEGFVEVLAAQQTPENPNWFQGTADAVRQYLWLMEEWDVEEYLILSGDHLYRMDYRQFIQRHRDTGADITLSVIPIDERRASDFGLMKIDDSGRIIDFSEKPK 180          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.496e-64
Identity = 125/182 (68.68%), Postives = 144/182 (79.12%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA PL   YRLIDIP SNC+N  I+KIYVLTQFNSASLNRHLSR Y  N  G+ N+ FVEVLAAQQ+ ENPSWF GTADAV QYLWL EE +V E+L L+GDHLYRMDY  +IQ HRET ADITLS +P+D+K A++F  MKID+  R + FS+  +
Sbjct:    2 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEITKIYVLTQFNSASLNRHLSRTY--NFTGF-NDEFVEVLAAQQTAENPSWFQGTADAVRQYLWLMEEWDVDEYLILSGDHLYRMDYREYIQRHRETKADITLSVVPIDEKRASSFGLMKIDDNARVVDFSEKPK 180          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.552e-64
Identity = 124/182 (68.13%), Postives = 144/182 (79.12%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA P+   YRLIDIP SNC+N  I KIYVLTQFNSASLNRH++R Y  N  G+ +E FVEVLAAQQ+PENP+WF GTADAV QYLW+ +E +V EFL L+GDHLYRMDY  FIQ HRET+ADITLS +P+DD+ A+ F  MKID  GR I FS+  +
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFSGF-SEGFVEVLAAQQTPENPNWFQGTADAVRQYLWMLQEWDVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFSEKPK 180          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.552e-64
Identity = 124/182 (68.13%), Postives = 144/182 (79.12%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA P+   YRLIDIP SNC+N  I KIYVLTQFNSASLNRH++R Y  N  G+ +E FVEVLAAQQ+PENP+WF GTADAV QYLW+ +E +V EFL L+GDHLYRMDY  FIQ HRET+ADITLS +P+DD+ A+ F  MKID  GR I FS+  +
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFSGF-SEGFVEVLAAQQTPENPNWFQGTADAVRQYLWMLQEWDVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFSEKPK 180          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 8.211e-63
Identity = 122/182 (67.03%), Postives = 144/182 (79.12%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA PL   YRLIDIP SNC+N  I KIYVLTQFNSASLNRHL+R Y  N  G+ ++ FVEVLAAQQ+ ENPSWF GTADAV QY WLF+E +V E+L L+GDHLYRMDY  F++ HRET ADITLS +P+D+K A++F  MKID+ GR + FS+  +
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINAEILKIYVLTQFNSASLNRHLTRTY--NFTGF-HDGFVEVLAAQQTTENPSWFQGTADAVRQYGWLFDEWDVDEYLILSGDHLYRMDYSDFVKRHRETGADITLSVVPIDEKRASSFGLMKIDDNGRIVDFSEKPK 180          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.072e-62
Identity = 120/182 (65.93%), Postives = 145/182 (79.67%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            ++VL IILGGGAG+RLYPLTK+RAKPA PL   YRLIDIP SNC+N +I+KIYVLTQFNSASLNRHLS+ Y  N+       FVEVLAAQ +PENP+WF GTADAV QYLWL +E +V E+L L+GDHLYRMDY +FIQ HR+T+ADITLS LP+D+K A+ F  MK+D  GR + FS+  +
Sbjct:    2 KNVLAIILGGGAGSRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINADINKIYVLTQFNSASLNRHLSQTY--NLSSGFGNGFVEVLAAQITPENPNWFQGTADAVRQYLWLIKEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFSEKPK 181          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.072e-62
Identity = 120/182 (65.93%), Postives = 145/182 (79.67%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            ++VL IILGGGAG+RLYPLTK+RAKPA PL   YRLIDIP SNC+N +I+KIYVLTQFNSASLNRHLS+ Y  N+       FVEVLAAQ +PENP+WF GTADAV QYLWL +E +V E+L L+GDHLYRMDY +FIQ HR+T+ADITLS LP+D+K A+ F  MK+D  GR + FS+  +
Sbjct:    2 KNVLAIILGGGAGSRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINADINKIYVLTQFNSASLNRHLSQTY--NLSSGFGNGFVEVLAAQITPENPNWFQGTADAVRQYLWLIKEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFSEKPK 181          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            + VL IILGGGAGTRLYPLTK RAKPA PL   YRLIDIP SNC+N  I KIYVLTQFNSASLNRH+SRAY  N  G++ E FVEVLAAQQ+ +NP WF GTADAV QYLWLF E +V E+L L+GDHLYRMDY +F++ HRET+ADITLS +P+DD+ A     MKID +GR   FS+
Sbjct:   12 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEIVKIYVLTQFNSASLNRHISRAY--NFSGFQ-EGFVEVLAAQQTKDNPDWFQGTADAVRQYLWLFREWDVDEYLILSGDHLYRMDYAQFVKRHRETNADITLSVVPVDDRKAPELGLMKIDAQGRITDFSE 187          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.401e-62
Identity = 121/182 (66.48%), Postives = 143/182 (78.57%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA PL   YRLIDIP SNC+N  I KIYVLTQFNSASLNRHL+R Y  N  G+ ++ FVEVLAAQQ+ ENP WF GTADAV QYLW F+E ++ E+L L+GDHLYRMDY  FIQ HRET ADITLS +P+D++ A++F  MKID+ GR + FS+  +
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPLSNCINSEILKIYVLTQFNSASLNRHLTRTY--NFTGF-SDGFVEVLAAQQTAENPKWFQGTADAVRQYLWAFQEWDIDEYLILSGDHLYRMDYRDFIQRHRETGADITLSVVPIDEERASSFGLMKIDDHGRVVDFSEKPK 180          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.022e-61
Identity = 120/179 (67.04%), Postives = 137/179 (76.54%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            + VLGIILGGGAGTRLYPLTK RAKPA PL   YRLIDIP SNC+N  I KIY+LTQFNSASLNRH+SR Y  N  G+  E F EVLAAQQ+ ENP WF GTADAV QY WL E+ +V E++ L+GDHLYRMDY  FIQ HR+T ADITLS +P+ +K A AF  MKID  GR + FS+
Sbjct:    2 KRVLGIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEIHKIYILTQFNSASLNRHISRTY--NFTGF-TEGFTEVLAAQQTKENPDWFQGTADAVRQYSWLLEDWDVDEYIILSGDHLYRMDYREFIQRHRDTGADITLSVVPVGEKVAPAFGLMKIDANGRVVDFSE 177          
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_NOSP71.496e-6468.13Glucose-1-phosphate adenylyltransferase OS=Nostoc ... [more]
GLGC_CYAP71.496e-6468.68Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_ANAVT2.552e-6468.13Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_ANASP2.552e-6468.13Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_CYAA58.211e-6367.03Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNP61.072e-6265.93Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNE71.072e-6265.93Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNY31.401e-6268.16Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAP81.401e-6266.48Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNP22.022e-6167.04Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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