EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.920e-60
Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + VL IILGGGAGTRLYPLTK RAKPA PL   YRLIDIP SNC+N NI+K+YVLTQFNSASLNRHLS+ Y  N+     + FVEVLAAQQ+PE+PSWF GTADAV +Y WLF+E +V E+L L+GD LYRMDY  FI  HR T AD+T++ALP+D K A AF  M+ DE+GR + F +  +
Sbjct:    2 KRVLAIILGGGAGTRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSNINKMYVLTQFNSASLNRHLSQTY--NLSAGFGQGFVEVLAAQQTPESPSWFEGTADAVRKYQWLFQEWDVDEYLILSGDQLYRMDYSLFINHHRSTGADLTVAALPVDAKQAEAFGLMRTDEDGRILEFREKPK 181          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP4 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glgC PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.893e-59
Identity = 112/179 (62.57%), Postives = 139/179 (77.65%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            + VL IILGGGAGTRLYPLTK+RAKPA PL   YRLIDIP SNC+N  I+ +YVLTQFNSASLNRH++R Y  N  G+ ++ FVEVLAAQQ+PENP WF GTADAV QYLWL  +  V  +L L+GDHLYRMDY  F+  HR+T+ADITLS LP++++ A++F  +++D  GR   FS+
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINSEITHVYVLTQFNSASLNRHIARTY--NFSGF-SDGFVEVLAAQQTPENPDWFQGTADAVRQYLWLLSDWEVDYYLILSGDHLYRMDYRLFVNRHRDTNADITLSVLPVEEQVASSFGLLQVDHSGRVTAFSE 177          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 6.732e-57
Identity = 119/247 (48.18%), Postives = 166/247 (67.21%), Query Frame = 2
Query:  176 VKRLAFSSSQLSGDKIFSKAVTGDRR------NERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSP--ENPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            +K  +F + +L G K+    +   R       +++R ++       +SK  +   +    R+V  IILGGGAGTRL+PLTK+RAKPA P+G  YRLID+P SNC+N  I+K+Y+LTQ+NSASLNRHL+RAY SN  G+  + +VEVLAA Q+P      WF GTADAV Q+ WLFE+    ++ + L L+GDHLYRMDY  FIQ HR++ ADI++S +P+DD+ A+ F  MKID++GR I FS+  +
Sbjct:   28 IKLGSFCNGELMGKKLNLSQLPNIRLRSSTNFSQKRILMSLNSVAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNSNGLGF-GDGYVEVLAATQTPGESGKRWFQGTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMDFIQDHRQSGADISISCIPIDDRRASDFGLMKIDDKGRVISFSEKPK 273          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.075e-54
Identity = 107/188 (56.91%), Postives = 140/188 (74.47%), Query Frame = 2
Query:  335 SRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPE--NPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            +R+V+ IILGGGAGTRL+PLTK+RAKPA P+G  YRLID+P SNC+N  I+K+Y+LTQFNSASLNRH++RAY    G      +VEVLAA Q+P      WF GTA AV Q+ WLFE+    ++ + L L+GDHLYRMDY  F+Q+HR++ ADIT+S+LP+DD  A+ F  MKID+ GR + FS+  +
Sbjct:   46 ARTVVAIILGGGAGTRLFPLTKRRAKPAVPMGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNFGNGVTFESGYVEVLAATQTPGELGKRWFQGTAHAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYLHFVQSHRQSGADITISSLPIDDSRASDFGLMKIDDTGRVMSFSEKPK 233          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 7.703e-53
Identity = 108/187 (57.75%), Postives = 133/187 (71.12%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQS--PENPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            ++V  IILGGGAGTRL+PLT KRAKPA P+G  YRLIDIP SNC+N  I KI++LTQFNS SLNRHLSR Y    G    + FVEVLAA Q+       WF GTADAV Q++W+FE+    NV   L L+GDHLYRMDY  F+Q H E++ADIT+S LPMD+  A+ F  +KID+ G+ I FS+  +
Sbjct:   83 KNVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMNFVQKHIESNADITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPK 269          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.230e-50
Identity = 107/208 (51.44%), Postives = 139/208 (66.83%), Query Frame = 2
Query:  284 QAVSDSKNSQTCL--DPEAS-RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSP--ENPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            Q+V +S   +  L   P+A  ++V  I+LGGGAGTRL+PLT +RAKPA P+G  YRLID+P SNC+N  I KI++LTQFNS SLNRHL+R Y    G    + FVEV AA Q+P      WF GTADAV Q+ W FE+    +V   + L+GDHLYRMDY  F Q H +T+ADIT+S +PMDD  A+ +  MKID  GR + F++  +
Sbjct:   66 QSVKESLKYEPALFESPKADPKNVAAIVLGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLARTYNFGDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWAFEDSKSKDVEHIVILSGDHLYRMDYMSFWQKHIDTNADITVSCIPMDDSRASDYGLMKIDHTGRIVHFAEKPK 273          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL3_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.963e-48
Identity = 113/240 (47.08%), Postives = 150/240 (62.50%), Query Frame = 2
Query:  197 SSQLSGDKIFSKAVTGDRRNERRPIVVSPQAVSDSKNSQTCLDPEAS---------RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSP--ENPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            SS LS  K         R  + RP V    A++ SKN++  L  + S         ++V  IILGGG G +L+PLTK+ A PA P+G  YR+IDIP SNC+N  I+KI+VLTQFNSASLNRHL+R Y  N G    + FVEVLAA Q+P      WF GTADAV ++LW+FE+    N+   + L+GDHLYRM+Y  F+Q H ++ ADITLS  P+D+  A+ +  + ID  GR + FS+
Sbjct:   41 SSDLSSKKF--------RNRKLRPGVA--YAIATSKNAKEALKNQPSMFERRRADPKNVAAIILGGGDGAKLFPLTKRAATPAVPVGGCYRMIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN-GINFGDGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENIIILSGDHLYRMNYMDFVQHHVDSKADITLSCAPVDESRASEYGLVNIDRSGRVVHFSE 269          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL4_ARATH (Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.316e-47
Identity = 103/190 (54.21%), Postives = 132/190 (69.47%), Query Frame = 2
Query:  320 LDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSP--ENPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            +DP+   +V  IILGGG G +L+PLT + A PA P+G  YRLIDIP SNC+N  I+KI+VLTQFNSASLNRHL+R Y  N G      FVEVLAA Q+P      WF GTADAV ++LW+FE+    N+   L L+GDHLYRM+Y  F+Q+H +++ADITLS  P+ +  A+ F  +KID  GR I FS+
Sbjct:   86 VDPQ---NVAAIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN-GINFGGGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENILILSGDHLYRMNYMDFVQSHVDSNADITLSCAPVSESRASNFGLVKIDRGGRVIHFSE 271          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL2_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.407e-46
Identity = 109/234 (46.58%), Postives = 143/234 (61.11%), Query Frame = 2
Query:  197 SSQLSGDKIFSKAVTGDRRNERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPEN--PSWFHGTADAVMQYLWLFEEH---NVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            ++Q  G  +    +T D   E  P   S          Q   DP+A   V  +ILGGG GTRL+PLT +RAKPA P+G  YRLID+P SNC+N  I KI++LTQFNS SLNRHL+     N  G+  + FVEVLA  Q+P +    WF   ADAV +++W+FE     NV   + L+GDHLYRM+Y  F+Q H +T+ADIT+S +PMDD  A+ F  MKIDE G  I F++  +
Sbjct:   48 TTQQRGRNVTPAVLTRDINKEMLPFEES------MFEEQPTADPKA---VASVILGGGVGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLATYNFGNGVGF-GDGFVEVLAGTQTPGDGRKMWFQ-AADAVREFIWVFENQKNKNVEHIIILSGDHLYRMNYMDFVQKHIDTNADITVSCVPMDDGRASDFGLMKIDETGAIIQFAEKPK 270          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.400e-46
Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSP--ENPSWFHGTADAVMQYLWLFEE---HNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + V  +ILGGG GT+L+PLT + A PA P+G  YRLIDIP SNC+N  I+KI+VLTQ+NSA LNRH++R Y  N G    + FVEVLAA Q+P      WF GTADAV +++W+FE+    N+   + L+GDHLYRMDY   +Q H + +ADITLS  P +D  A+ F  +KID  GR + F++  +
Sbjct:   36 KDVAAVILGGGEGTKLFPLTSRTATPAVPVGGCYRLIDIPMSNCINSAINKIFVLTQYNSAPLNRHIARTYFGN-GVSFGDGFVEVLAATQTPGEAGKKWFQGTADAVRKFIWVFEDAKNKNIENIVVLSGDHLYRMDYMELVQNHIDRNADITLSCAPAEDSRASDFGLVKIDSRGRVVQFAEKPK 221          
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_SYNPW2.920e-6064.29Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAP41.893e-5962.57Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGL1_ARATH6.732e-5748.18Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_SOLTU1.075e-5456.91Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_ARATH7.703e-5357.75Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_BETVU1.230e-5051.44Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_ARATH1.963e-4847.08Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL4_ARATH6.316e-4754.21Probable glucose-1-phosphate adenylyltransferase l... [more]
GLGL2_SOLTU1.407e-4646.58Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_SOLTU2.400e-4650.80Glucose-1-phosphate adenylyltransferase large subu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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