EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_OCEIH (Glucose-1-phosphate adenylyltransferase OS=Oceanobacillus iheyensis GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 2
Query:  347 LGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEE 850
            +G++L GG G RL  LTK+ AKPA P G  YR+ID   SNC N  I  + +LTQ+    LN+H+      +M        V +L      +   W+ GTADA+ Q +    ++     L ++GDH+Y+MDY++ ++ H+ T+AD+T+S + +    A  F  +  ++E
Sbjct:    5 IGMLLAGGEGKRLGMLTKQGAKPAVPFGGKYRIIDFTLSNCTNSGIQTVGILTQYAPLELNKHIGNGKPWDMN--HQHGGVSILPPYTGTKGGDWYSGTADAIYQNMNFIHQYEPEYVLIISGDHIYQMDYQQMLEQHKRTNADVTISVIEVPWAEAGRFGILHANDE 170          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_MYXXD (Glucose-1-phosphate adenylyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25
Identity = 68/180 (37.78%), Postives = 98/180 (54.44%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            VL +IL GGAGTRL PLT++RAKPA P G  YR+ID   SN  N  + ++ VLTQ+ S SLN HLSRA+   M  +    +VE + AQ       W+ G+ADA+ Q L +  +           DH+YRMD  + +  H    A  T++A+P+  +    F  + +  +GR   F +  +
Sbjct:    4 VLAMILAGGAGTRLEPLTRERAKPAVPFGGRYRIIDFVLSNFANSGVYRMKVLTQYKSDSLNNHLSRAW--RMTAFLG-HYVEAVPAQMR-TGLDWYKGSADAIYQNLNIITDEEPDYIFVFGADHVYRMDTRQMLDFHCTKKAACTVAAIPVPIEQGREFGIIDVGPDGRMRQFLEKPK 179          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_HAEI8 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=glgC PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25
Identity = 63/171 (36.84%), Postives = 101/171 (59.06%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEF-LGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDE 847
            ++ L ++L GG G+RL+ LT KRAKPA   G N R+ID   SNC+N  +++I V+TQ+ + SL RHL   +  +    +   FV++L A+Q  ++ +W+ GTADAV Q + + + H   ++ L LAGDH+Y+ DY   +  H  + A  T+  + +    A  F  M ++E
Sbjct:   17 KNTLVLVLAGGRGSRLHELTDKRAKPALYFGGNRRIIDFALSNCINSGLNRIGVVTQYAAHSLLRHLQTGW--SFLPQERGEFVDMLPARQQIDDSTWYRGTADAVYQNMAIIKNHYRPKYILILAGDHIYKQDYSVMLMDHVNSGAKCTIGCIEVPRSEAHEFGVMAVNE 185          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_ACIC1 (Glucose-1-phosphate adenylyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25
Identity = 69/163 (42.33%), Postives = 93/163 (57.06%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAF 826
            VLGI+L GG G RL PLT  RAKPA P G  YRLID   SN  N    KI VLTQ+ + SL+RH++  +  ++ +G Y     V  + AQQ    P WF G+ADA+ Q L L  +      L    DH+YRMD  + ++ H  + A +T++A+ +  K A AF
Sbjct:    7 VLGIVLAGGQGRRLLPLTADRAKPAVPFGGIYRLIDFVLSNLANAGFLKIVVLTQYKNHSLDRHITTTWRMSTLLGNY-----VTPVPAQQR-VGPRWFSGSADAIFQSLNLVYDEQPDYILVFGADHIYRMDPRQMLEEHIASGASVTVAAVRVPRKDAHAF 163          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THENN (Glucose-1-phosphate adenylyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glgC PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.795e-25
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  341 SVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            +V+ +IL GG GTRL  LT++ AKPA P G  YRLID   SNC+N  I ++ VLTQ+    L +H+      ++   + +  VE+L          W+ GTA+AV Q L   EE++    L L+GDH+Y M+Y   I  H    AD T++ + +  + A+ F  M  D EGR + F +
Sbjct:    3 NVVAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLAKHIGIGRPWDLD--RKDGGVEILPPYVGRNESDWYKGTANAVYQNLEFLEENDAELVLVLSGDHVYAMNYNDLIDYHLLKGADGTIACMEVPLEEASRFGIMITDVEGRIVDFEE 178          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_MYCMO (Glucose-1-phosphate adenylyltransferase OS=Mycoplasma mobile GN=glgC PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.795e-25
Identity = 60/182 (32.97%), Postives = 99/182 (54.40%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            + ++ +IL GG GTRL  LTKK AKPA P GA YR+ID   SNC+N  I  + VLTQ+   SL +H+      ++        V +L+         W+ GTA A+ + +    E++    L L+GDH+Y+MDY + +  H+E +A++T++ + +  + A+ F  +  +E      F +  +
Sbjct:    4 KEMIAMILAGGQGTRLKNLTKKIAKPAVPFGAKYRIIDFTLSNCINSGIDTVGVLTQYRPLSLLKHIGSGIPFDLNRLNGG--VVLLSPYVKESEGYWYAGTAHAIFENIDFMNEYDPTYALILSGDHIYKMDYSKMLDFHKEKNANVTIATINVSFEEASRFGILNTNENNMVEEFEEKPK 183          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THESQ (Glucose-1-phosphate adenylyltransferase OS=Thermotoga sp. (strain RQ2) GN=glgC PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.875e-25
Identity = 65/178 (36.52%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  341 SVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            + + +IL GG GTRL  LT++ AKPA P G  YRLID   SNC+N  I ++ VLTQ+    L++H+      ++   + +  VE+L          W+ GTA+AV Q L   EE++    L L+GDH+Y M+Y   I  H   +AD T++ + +  + A+ F  M  D +GR + F +
Sbjct:    3 NTVAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLSKHIGIGRPWDLD--RKDGGVEILPPYVGRHESDWYKGTANAVYQNLEFLEENDAELVLILSGDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEEASRFGIMITDVDGRIVDFEE 178          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THEMA (Glucose-1-phosphate adenylyltransferase OS=Thermotoga maritima GN=glgC PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.875e-25
Identity = 65/178 (36.52%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  341 SVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            + + +IL GG GTRL  LT++ AKPA P G  YRLID   SNC+N  I ++ VLTQ+    L++H+      ++   + +  VE+L          W+ GTA+AV Q L   EE++    L L+GDH+Y M+Y   I  H   +AD T++ + +  + A+ F  M  D +GR + F +
Sbjct:    3 NTVAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLSKHIGIGRPWDLD--RKDGGVEILPPYVGRHESDWYKGTANAVYQNLEFLEENDAELVLILSGDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEEASRFGIMITDVDGRIVDFEE 178          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THEAB (Glucose-1-phosphate adenylyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glgC PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.875e-25
Identity = 65/183 (35.52%), Postives = 101/183 (55.19%), Query Frame = 2
Query:  338 RSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQRR 886
            ++V+ +IL GG GTRL  LT+K AKPA   G  YRLID   SNC+N  I KI VLTQ+    LN+H+      ++   + +  V +L    + +   W++GTADAV + +   +++N    + L+GDH+Y MDY   +  H+   A  T++ + +    A+ F  M  D E R I F +  ++
Sbjct:    2 KNVVALILAGGQGTRLGVLTEKIAKPAVQFGGKYRLIDFTLSNCVNSGIYKIGVLTQYKPHLLNQHIGIGKPWDLD--RKDGGVTILQPYYTEKKGVWYNGTADAVYRNIEFVDDYNPEYVVILSGDHIYSMDYNELLDYHKAKSALATVACMEVPLSEASRFGIMVTDLENRIIEFQEKPKQ 182          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_FRASC (Glucose-1-phosphate adenylyltransferase OS=Frankia sp. (strain CcI3) GN=glgC PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.875e-25
Identity = 71/177 (40.11%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  335 SRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAY-ASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSI 862
            S  VLG++L GGAG RL PLT  RAKPA P G  YRLID   SN +N    +I VLTQ+ S SL+RH++  +  SN+ G     +V  + AQQ    P WF G+ADA+ Q L L  +      +    DH+YRMD  + +  H ++ A +T++ L +      AF  ++   +GR+I
Sbjct:    3 SPRVLGLVLAGGAGRRLAPLTADRAKPAVPFGGLYRLIDFVLSNLVNAGYLRIAVLTQYKSHSLDRHITTTWRMSNLLG----NYVTPVPAQQR-LGPRWFAGSADAIHQSLNLVYDDAPDIVVVFGADHVYRMDPRQMVAQHLDSGAGVTVAGLRVPRSEGRAFGVIQTAPDGRTI 174          
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_OCEIH3.984e-2534.52Glucose-1-phosphate adenylyltransferase OS=Oceanob... [more]
GLGC_MYXXD3.984e-2537.78Glucose-1-phosphate adenylyltransferase OS=Myxococ... [more]
GLGC_HAEI83.984e-2536.84Glucose-1-phosphate adenylyltransferase OS=Haemoph... [more]
GLGC_ACIC13.984e-2542.33Glucose-1-phosphate adenylyltransferase OS=Acidoth... [more]
GLGC_THENN6.795e-2537.64Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_MYCMO6.795e-2532.97Glucose-1-phosphate adenylyltransferase OS=Mycopla... [more]
GLGC_THESQ8.875e-2536.52Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_THEMA8.875e-2536.52Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_THEAB8.875e-2535.52Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLGC_FRASC8.875e-2540.11Glucose-1-phosphate adenylyltransferase OS=Frankia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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