EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43
Identity = 111/258 (43.02%), Postives = 149/258 (57.75%), Query Frame = 2
Query:  170 SVVKRLAFSSSQLS-GDKIFSKAVTGDRR---NERRPIVVSPQAV--SDSKNSQTCLDPEASR-------SVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--ERFVEVLAAQQSP-ENPSWFHGTADAVMQYLWLFEEH----NVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            S V+R   +S +L  GD    +     RR     R P     Q V  SD+  + T +   + R        V  +ILGGG GT+L+PLT  RA PA P+G  YRLIDIP SNC N  I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +  VEVLAA Q P E   WF GTADAV +++W+ E++    ++   L L+GD LYRMDY   +Q H + +ADITLS  P+ +  A+ +  +K D  GR + FS+  +
Sbjct:   19 SPVRREGSASERLKVGDSSSIRHERASRRMCNGGRGPAATGAQCVLTSDASPADTLVLRTSFRRNYADPNEVAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVVQFSEKPK 273          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43
Identity = 97/187 (51.87%), Postives = 124/187 (66.31%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--ERFVEVLAAQQSP-ENPSWFHGTADAVMQYLWLFEE---HNVLE-FLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            V  +ILGGG GT+L+PLT  RA PA P+G  YRLIDIP SNC N  I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +  VEVLAA Q P E   WF GTADAV +++W+ E+   H  +E  L L+GD LYRMDY   +Q H + +ADITLS  P+ +  A+ +  +K D  GR I FS+  +
Sbjct:   87 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGRVIQFSEKPK 270          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43
Identity = 95/187 (50.80%), Postives = 124/187 (66.31%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--ERFVEVLAAQQSP-ENPSWFHGTADAVMQYLWLFEEH----NVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            V  +ILGGG GT+L+PLT  RA PA P+G  YRLIDIP SNC N  I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +  VEVLAA Q P E   WF GTADAV +++W+ E++    ++   L L+GD LYRMDY   +Q H + +ADITLS  P+ +  A+ +  +K D  GR I FS+  +
Sbjct:   91 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKHKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVIQFSEKPK 274          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.746e-42
Identity = 93/187 (49.73%), Postives = 122/187 (65.24%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--ERFVEVLAAQQSP-ENPSWFHGTADAVMQYLWLFEEH----NVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            V  +ILGGG GT+L+PLT  RA PA P+G  YRLIDIP SNC N  I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +  VEVLAA Q P E   WF GTADA  + +W+ E++    ++   L L+GD LYRMDY   +Q H + +ADITLS  P+ +  A+ +  +K D  GR + FS+  +
Sbjct:   71 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAWRKIIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVVQFSEQPK 254          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.363e-41
Identity = 98/233 (42.06%), Postives = 141/233 (60.52%), Query Frame = 2
Query:  215 DKIFSKAVTGDRRNERRPIVVSPQAVSDSKNSQTCLD----PEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYK-NERFVEVLAAQQSPENPS-WFHGTADAVMQYLWLFEEH----NVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            +K       G R       +++  A  ++ +SQT        +A+R V  IILGGG G++L+PLT  RA PA P+G  YRLIDIP SNC N  I+KI+V++QFNS SLNRH+ R Y    GG    +  V+VLAA Q PE P+ WF GTAD++ +++W+ E++    ++   + L+GD LYRM+Y   +Q H E DADIT+S  P+D+  A+    +KID  GR + F +  +
Sbjct:   38 EKALRNRCFGGRVAATTQCILTSDACPETLHSQTQSSRKNYADANR-VSAIILGGGTGSQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMSQFNSTSLNRHIHRTYLE--GGINFADGSVQVLAATQMPEEPAGWFQGTADSIRKFIWVLEDYYSHKSIDNIVILSGDQLYRMNYMELVQKHVEDDADITISCAPVDESRASKNGLVKIDHTGRVLQFFEKPK 267          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THIDA (Glucose-1-phosphate adenylyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgC PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35
Identity = 83/194 (42.78%), Postives = 114/194 (58.76%), Query Frame = 2
Query:  308 SQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--RFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            ++  L  E +R  L ++L GG G+RL  LT  RAKPA P+G  YR+ID P SNC+N  I +I VLTQ+ S SL RHL RA+    G  + E   FVE+L AQQ      W+ GTADA+ Q L + + H+    L L GDH+Y MDY + +  H +T AD+T+ ++ +    A AF  M +DE  R   F++  R
Sbjct:   16 TEPTLVTELTRKTLALVLAGGEGSRLKDLTAWRAKPAVPIGGKYRIIDFPLSNCVNSGIRRIGVLTQYKSHSLIRHLQRAW----GLMRTEVGEFVEILPAQQRTHKKEWYQGTADALFQNLDIMQRHHPEYVLVLGGDHVYTMDYTQMLLYHVQTGADVTVGSVEVPVAEAAAFGVMSVDESLRITEFNEKPR 205          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_NITEU (Glucose-1-phosphate adenylyltransferase OS=Nitrosomonas europaea GN=glgC PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35
Identity = 77/180 (42.78%), Postives = 112/180 (62.22%), Query Frame = 2
Query:  335 SRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            +R+ L +IL GG GTRL  LT  RAKPA P G  +R+ID   SNC+N  + +I V+TQ+ + SL RH+ R ++   G +  + F+E+L AQQ  E  +W+ GTADAV Q L +   HN    L L GDH+Y+MDY R +  H E  AD+T++ L +  + A+AF  M +D+  R+  F++
Sbjct:   20 TRNTLALILAGGRGTRLKNLTDWRAKPAVPFGGKFRIIDFTLSNCVNSGVRRIGVVTQYKAQSLIRHIQRGWSFLDGRF--QEFIELLPAQQRTEEGTWYQGTADAVFQNLDILRTHNPGYVLILGGDHIYKMDYGRILAEHVERQADLTIACLEVPVEDASAFGVMAVDDSWRTTSFAE 197          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_BURXL (Glucose-1-phosphate adenylyltransferase OS=Burkholderia xenovorans (strain LB400) GN=glgC PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.752e-34
Identity = 79/180 (43.89%), Postives = 103/180 (57.22%), Query Frame = 2
Query:  329 EASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            +  R+ L I+L GG GTRL PLT KR KPA   G  YR+ID   SNCLN  I +I V+TQ+ + SL RHL R ++   G +    F+++  AQQ  E   W+ GTADAV Q L +         + LAGDH+Y+MDY R I  H E+ AD T+  + +    A AF  M +DE  R  GF
Sbjct:    9 DLQRTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGWSFLRGEF--GEFIDLWPAQQRVEGAHWYRGTADAVFQNLDIIRSIRPKYVVVLAGDHIYKMDYTRMIADHAESGADCTVGCIEVPRMDAVAFGVMHVDENRRVTGF 186          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_BURP8 (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=glgC PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.008e-34
Identity = 77/180 (42.78%), Postives = 102/180 (56.67%), Query Frame = 2
Query:  329 EASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            +   + L I+L GG GTRL PLT KR KPA   G  YR+ID   SNCLN  I +I V+TQ+ + SL RH+ R +    G +    F+++  AQQ  E   W+ GTADAV Q L +         + LAGDH+Y+MDY R +  H E+ AD T+  + +    A AF  M +DEE R  GF
Sbjct:    9 DLQHTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHVQRGWGFLRGEF--NEFIDLWPAQQRVEGAHWYRGTADAVFQNLDIIRSIRPKYVVVLAGDHIYKMDYTRMVMDHVESKADCTVGCIEVPRMEAVAFGVMHVDEERRVTGF 186          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC1_ALHEH (Glucose-1-phosphate adenylyltransferase 1 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.008e-34
Identity = 76/183 (41.53%), Postives = 110/183 (60.11%), Query Frame = 2
Query:  335 SRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            +R  L +I+ GG G RL  LT  R KPA P G  +RLID P SNC+N  I +I VLTQ+ + SL +H+ R +    G +    FVE++ AQQ  + P W+ GTADAV Q + + + HN    L LAGDH+Y+MDY   I  H E+ A +T+  + +  K A+AF  M ++EE + + F++  +
Sbjct:   14 TRDTLALIMAGGRGGRLSNLTDWRTKPAVPFGGKFRLIDFPLSNCINSGIRRIEVLTQYKAHSLIQHIQRGWGFLRGEFGE--FVELVPAQQRMDKPLWYAGTADAVYQNIDIIKAHNPSYVLVLAGDHVYKMDYGGMIARHAESGAAMTVGCVEVPRKRASAFGVMSVNEERQVLAFNEKPK 194          
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGL2_WHEAT1.115e-4343.02Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE1.115e-4351.87Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_HORVU1.115e-4350.80Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_WHEAT2.746e-4249.73Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_MAIZE1.363e-4142.06Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_THIDA1.459e-3542.78Glucose-1-phosphate adenylyltransferase OS=Thiobac... [more]
GLGC_NITEU1.459e-3542.78Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_BURXL2.752e-3443.89Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]
GLGC_BURP88.008e-3442.78Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]
GLGC1_ALHEH8.008e-3441.53Glucose-1-phosphate adenylyltransferase 1 OS=Alkal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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