EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5044 contig Csv1_Contig5044:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_NITOC (Glucose-1-phosphate adenylyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgC PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.046e-33
Identity = 83/192 (43.23%), Postives = 114/192 (59.38%), Query Frame = 2
Query:  299 SKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            +KN         +R  L +IL GG G+RL  LT  RAKPA P+G  +R+ID P SNC+N  + +I VLTQ+ + SL RH+ + +   M GY  E FVE++ A Q  E+ SW+ GTADAV Q L +   HN    L LAGDH+Y+MDY   +  H E +AD+T+  + +  K A AF  M +DE  R   F++
Sbjct:    2 TKNYSARFVSRLTRDTLALILAGGRGSRLKNLTAWRAKPAVPIGGKFRIIDFPLSNCVNSGVRRICVLTQYKAHSLVRHIQQGWGF-MRGYLGE-FVELMPASQRIED-SWYAGTADAVYQNLDIVRSHNPEYVLILAGDHVYKMDYGDMLAYHVEREADMTVGCIHVPLKEAKAFGVMSVDENFRVTEFTE 190          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC2_ALHEH (Glucose-1-phosphate adenylyltransferase 2 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC2 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.366e-33
Identity = 81/180 (45.00%), Postives = 109/180 (60.56%), Query Frame = 2
Query:  335 SRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            +R+ L +IL GG G+RL  LT  RAKPA P G  +R+ID   SNC+N  I +I VLTQ+ + SL RHL   + S  G +    FVE+L AQQ  E  SW+ GTADAV Q L +   H+    L LAGDH+Y+MDY   +  H ET AD+T+  L +  + A+AF  M +D + R + F +
Sbjct:   14 TRNTLVLILAGGRGSRLMDLTTWRAKPAVPFGGKFRIIDFTLSNCINSGIRRIGVLTQYKAHSLIRHLRLGWGSLRGDF--GEFVEILPAQQRTEG-SWYRGTADAVYQSLDIVRMHDPDYVLILAGDHVYKMDYGPMLARHVETGADVTVGCLEVPVEEASAFGVMAVDGDNRVVRFQE 190          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THET8 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgC PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.043e-33
Identity = 75/180 (41.67%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQ---SPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            VLG+IL GG G+RLYPLT KRAKPA P GA YR+ID   +N +N  I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ        P W+ GTADA+ Q L L   H         GDH+++M+    ++ H +T ADIT++A P+    AT F  +++DEE R   F +
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEFQE 183          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THET2 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgC PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.043e-33
Identity = 75/180 (41.67%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQ---SPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            VLG+IL GG G+RLYPLT KRAKPA P GA YR+ID   +N +N  I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ        P W+ GTADA+ Q L L   H         GDH+++M+    ++ H +T ADIT++A P+    AT F  +++DEE R   F +
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEFQE 183          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THECA (Glucose-1-phosphate adenylyltransferase OS=Thermus caldophilus GN=glgC PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.043e-33
Identity = 75/180 (41.67%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQ---SPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSD 874
            VLG+IL GG G+RLYPLT KRAKPA P GA YR+ID   +N +N  I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ        P W+ GTADA+ Q L L   H         GDH+++M+    ++ H +T ADIT++A P+    AT F  +++DEE R   F +
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEFQE 183          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_THICR (Glucose-1-phosphate adenylyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.974e-33
Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = 2
Query:  329 EASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDE 847
            + +R  L ++L GG G+RL  LTK RAKPA P G  YR+ID   SNC+N  I KI VLTQ+ S SL RH+ RA+  +   Y+   FVE+L AQQ  +   W+ GTADA+ Q L +   H     L L GDH+Y MDY + +  H E+ AD+T+  + +    AT F  M +DE
Sbjct:   12 DLTRKTLALVLAGGEGSRLKDLTKWRAKPAVPFGGKYRIIDFVLSNCVNSGIRKIGVLTQYKSHSLIRHVQRAW--SFMRYEVGEFVELLPAQQRVDK-GWYKGTADALYQNLDIMRRHTPDYVLVLGGDHIYSMDYSKMLYEHAESGADVTIGCIEVPRMEATGFGVMSVDE 181          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALTY (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhimurium GN=glgC PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALSV (Glucose-1-phosphate adenylyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALPK (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192          
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALPC (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192          
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_NITOC1.046e-3343.23Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC2_ALHEH1.366e-3345.00Glucose-1-phosphate adenylyltransferase 2 OS=Alkal... [more]
GLGC_THET83.043e-3341.67Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THET23.043e-3341.67Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THECA3.043e-3341.67Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THICR3.974e-3344.51Glucose-1-phosphate adenylyltransferase OS=Thiomic... [more]
GLGC_SALTY6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALSV6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPK6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPC6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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