EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5044 contig Csv1_Contig5044:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALPB (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALPA (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALNS (Glucose-1-phosphate adenylyltransferase OS=Salmonella newport (strain SL254) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALHS (Glucose-1-phosphate adenylyltransferase OS=Salmonella heidelberg (strain SL476) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALEP (Glucose-1-phosphate adenylyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALCH (Glucose-1-phosphate adenylyltransferase OS=Salmonella choleraesuis GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALA4 (Glucose-1-phosphate adenylyltransferase OS=Salmonella agona (strain SL483) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.779e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALAR (Glucose-1-phosphate adenylyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgC PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.854e-33
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMQGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDESEKIIDF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_ACIBL (Glucose-1-phosphate adenylyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glgC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32
Identity = 68/179 (37.99%), Postives = 110/179 (61.45%), Query Frame = 2 
Query:  347 LGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            LG++L GGAG RLYPLT+ RAKPA   G  YR+IDI  SNC+N  + ++Y+LTQ+ + SLNRH+   ++  +G    E F+E+L   +   + +W+ GTADAV Q ++          L L+GDH+Y+M+Y+  ++ H+++ AD+TL+ + +D      F  + +D +    GF +  +
Sbjct:    5 LGVLLAGGAGERLYPLTRDRAKPAVNFGGIYRIIDITLSNCINSGLRRVYILTQYKALSLNRHIREGWSGIVGNELGE-FIEILPPMKR-VSENWYMGTADAVYQNIYSIGSEQPRYVLILSGDHIYKMNYDLMMRQHKDSGADVTLATILIDPSETRHFGVVDVDNQSHVNGFVEKPK 181
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SALDC (Glucose-1-phosphate adenylyltransferase OS=Salmonella dublin (strain CT_02021853) GN=glgC PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.510e-32
Identity = 78/193 (40.41%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNCLN  I +I V+TQ+ S +L +H+ R ++  +   +   FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T+  +P+  K ATAF  M +DE  + I F
Sbjct:    2 VSLEKNDRVMLARQLPLESVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGWS--LFSEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVVCMPVPIKEATAFGVMAVDESDKIIDF 192
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_SALPB6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPA6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALNS6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALHS6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALEP6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALCH6.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALA46.779e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALAR8.854e-3340.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_ACIBL1.156e-3237.99Glucose-1-phosphate adenylyltransferase OS=Acidoba... [more]
GLGC_SALDC1.510e-3240.41Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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