EY702826

Overview
NameEY702826
Unique NameEY702826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5044 contig Csv1_Contig5044:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_LACLA (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.858e-31
Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 2 
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGFSDNQR 883
            +LG+IL GG GTRL  LTK  AKPA P G  YR+ID   SNC N N+  + V+TQ+   +LN H+       + G  +   V +L    S E   WF GT+ AV Q +   ++ N    L L+GDH+Y+MDYE  +++H+E +A +T+S + +  + A+ F  M  D+  R I F +  +
Sbjct:    5 MLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALSNCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGINSG--VTILQPYSSQEGSKWFEGTSHAVYQNISYIDQQNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEEASRFGIMNTDDNDRIIEFEEKPK 182
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_DEIGD (Glucose-1-phosphate adenylyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgC PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.858e-31
Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 2 
Query:  344 VLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQ---SPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VLG+IL GG G+RL PLT KR+KPA P G  YR+ID   +N +N  +  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ          W+ GTADAV Q L L +  N       +GDH+Y+M+ E  +QAH +  AD+T++A PM    A  F  M++D+  R   F
Sbjct:    5 VLGMILAGGQGSRLAPLTLKRSKPAVPFGGKYRIIDFAINNFINSGVFSIYVLTQYKAQSLTEHIQRGW--RFGTFLQDYFITLVPAQMYRYEELGAVWYRGTADAVYQNLHLIDNFNADYVAIFSGDHIYKMNVEHMLQAHMDARADVTIAAYPMPRTRAHQFGVMQVDDRWRVTEF 180
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SHISS (Glucose-1-phosphate adenylyltransferase OS=Shigella sonnei (strain Ss046) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SHIFL (Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri GN=glgC PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SHIF8 (Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SHIDS (Glucose-1-phosphate adenylyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SHIBS (Glucose-1-phosphate adenylyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_SHIB3 (Glucose-1-phosphate adenylyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_ECOUT (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=glgC PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of EY702826 vs. ExPASy Swiss-Prot
Match: GLGC_ECOSM (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  290 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAGPLGANYRLIDIPASNCLNRNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNERFVEVLAAQQSPENPSWFHGTADAVMQYLWLFEEHNVLEFLGLAGDHLYRMDYERFIQAHRETDADITLSALPMDDKPATAFCPMKIDEEGRSIGF 868
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPA   G  +R+ID   SNC+N  I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  +W+ GTADAV Q L +   +     + LAGDH+Y+ DY R +  H E  A  T++ +P+  + A+AF  M +DE  + I F
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
The following BLAST results are available for this feature:
BLAST of EY702826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_LACLA4.858e-3138.33Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_DEIGD4.858e-3140.45Glucose-1-phosphate adenylyltransferase OS=Deinoco... [more]
GLGC_SHISS6.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIFL6.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIF86.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIDS6.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIBS6.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIB36.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_ECOUT6.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOSM6.345e-3139.90Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702826 ID=EY702826; Name=EY702826; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGACACTCTCTCTCCCACACACTCACTCAGGCTCAGCTCGC
TTAACGGTTACTGTTAACGTTAACATATGGCGAGTATGGCGTCGATTGGA
TCGCTCAAAGTTCCGTCATCTCCGTCAACCGCAGCAACGTCGTCTAACTC
CAACAATCACAGGCGCAGGAGTGTGGTTAAACGACTGGCGTTCTCGTCGT
CTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCACTGGTGATCGG
CGAAACGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGGTGTCGGATTC
GAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGG
GGATTATACTTGGAGGTGGAGCAGGGACTCGCTTGTATCCACTTACGAAG
AAGAGGGCAAAGCCTGCTGGTCCATTGGGAGCTAATTACAGGCTGATTGA
TATTCCTGCGAGCAATTGTTTGAATAGGAACATTTCAAAGATCTATGTTC
TCACTCAATTCAATTCTGCGTCCCTCAATCGGCACCTGTCGAGGGCGTAT
GCTAGCAACATGGGTGGTTACAAGAATGAAAGATTTGTTGAAGTTCTTGC
AGCACAGCAGAGTCCAGAGAATCCCAGTTGGTTTCACGGTACAGCTGATG
CTGTGATGCAGTATTTGTGGCTCTTTGAGGAGCACAATGTTCTGGAATTT
CTCGGTCTTGCTGGTGATCATTTGTACCGAATGGACTACGAGAGATTTAT
TCAGGCACACAGAGAAACTGATGCCGATATCACACTATCTGCGCTGCCAA
TGGATGACAAACCGGCTACTGCCTTTTGTCCTATGAAGATCGATGAAGAG
GGACGCAGTATTGGATTTTCGGACAACCAAAGGAGA
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