EY649704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas entomophila (strain L48) GN=dxs PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.171e-36 Identity = 68/122 (55.74%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 E +RP TPLLD + P ++ L+ +L+ LADELR D+++ V +TGGH G+ LGVIELT+ALHYVF+ P ++WDVGHQ YPHKILTGR D+M ++RQ DG + +SESEYD FG G Sbjct: 7 EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQDLLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRDRMLSLRQKDGIAAFPRRSESEYDTFGVG 128 HSP 2 Score: 27.7202 bits (60), Expect = 1.171e-36 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLK 770 HSSTSISA LGMA+ L+ Sbjct: 129 HSSTSISAALGMAIAARLQ 147
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.525e-36 Identity = 67/143 (46.85%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 319 GVCASLSERGEYHSQRPP-------------TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 GVC + + + S+ P TPLLDTI P ++ L + +L+Q+ADELR + I VS TGGH G+ LGV+ELT A+HY+F+ P+ ++WDVGHQ YPHKILTGR D++ T+R G SG ++ES+YD FG Sbjct: 2 GVCCATAPASDRRSRHPDMQNWNVAVTDFSKTPLLDTIRTPADLRKLRVEQLRQVADELRKETIDAVSVTGGHFGAGLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFG 144 HSP 2 Score: 33.8834 bits (76), Expect = 1.525e-36 Identity = 17/22 (77.27%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLKEXK 779 HSSTSISA LGMAV RDL K Sbjct: 147 HSSTSISASLGMAVARDLSGGK 168
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.525e-36 Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 367 PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 P TPLLD +N+P +K + R+L +LA ELR ++I VSKTGGHLG+ LGV+ELT+A+H VFN P+ +++DVGHQ YPHKILTGR D++ T+RQ DG SG ++ESEYD FG G Sbjct: 5 PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAG 120 HSP 2 Score: 27.7202 bits (60), Expect = 1.525e-36 Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LGMAV L Sbjct: 121 HSSTSISAGLGMAVAAGL 138
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEMY (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=dxs PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.526e-36 Identity = 66/122 (54.10%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 E +RP TPLLD+ N P ++ L+ +L+ LADELR ++++V ++GGH G+ LGVIELT+ALHYVF+ P ++WDVGHQ YPHKILTGR ++M ++RQ DG + +SESEYD FG G Sbjct: 7 EIPRERPLTPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFGVG 128 HSP 2 Score: 30.8018 bits (68), Expect = 1.526e-36 Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLKEXKK 782 HSSTSISA LGMA+ LK K+ Sbjct: 129 HSSTSISAALGMAIAARLKGEKR 151
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.987e-36 Identity = 69/112 (61.61%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 TPLLDT+ ++ L +L QLADELRA+ I VS TGGHLG+ LGV+ELTVALH+VFN P ++WDVGHQ YPHKILTGR D++ T+RQ G SG +SESEYD FG Sbjct: 6 TPLLDTVRDASDVRRLPEEKLSQLADELRAETISAVSVTGGHLGAGLGVVELTVALHHVFNTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFG 117 HSP 2 Score: 32.7278 bits (73), Expect = 1.987e-36 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LGMAV RDL Sbjct: 120 HSSTSISAGLGMAVARDL 137
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_POLNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=dxs PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.987e-36 Identity = 71/111 (63.96%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711 LL+TIN P ++ L +LK LADELRA VI +VS+TGGHL S+LG +ELTVALHYVFN P ++WDVGHQTYPHKILTGR ++M T+RQ G SG + ESEYD FGT Sbjct: 4 LLETINSPADLRRLPRAQLKALADELRAYVIDSVSQTGGHLSSNLGTVELTVALHYVFNTPDDRLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPRRDESEYDTFGT 114 HSP 2 Score: 28.4906 bits (62), Expect = 1.987e-36 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLK 770 HSSTSISA LGMA+ + K Sbjct: 116 HSSTSISAALGMALAAEFK 134
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.588e-36 Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 RP TPLLD P ++ L +L QLA ELRA++I VS TGGHLG+ LGV+ELTVALH+VF+ P I+WDVGHQ YPHKILTGR D++ T+RQT G SG ++ESEYD FG Sbjct: 3 RPTTPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALHHVFDTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFG 117 HSP 2 Score: 31.9574 bits (71), Expect = 2.588e-36 Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLKEXKK 782 HSSTSISA LGMAV DL K+ Sbjct: 120 HSSTSISAGLGMAVASDLSGEKR 142
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.588e-36 Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 TPLLD + +P ++ L L QLA+ELR + I VS TGGHLG+ LGV+ELTVALHY+FN P+ I+WDVGHQTYPHKILTGR +K+ T+RQ G SG + ES YD FG G Sbjct: 6 TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIFNTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRVESVYDPFGAG 119 HSP 2 Score: 34.6538 bits (78), Expect = 2.588e-36 Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLKEXKK 782 HSSTSISA LGMAV LKE KK Sbjct: 120 HSSTSISAGLGMAVASALKEEKK 142
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.371e-36 Identity = 69/114 (60.53%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 367 PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 P TPLLD ++ P MK LS R+L QLADELR++ + VS TGGHLG+ LGV+ELTVALH VF+ P+ I+WDVGHQ YPHKILT R D++ T+R G SG +SES YD FG Sbjct: 5 PKTPLLDLVHRPADMKGLSDRQLVQLADELRSETVSAVSVTGGHLGAGLGVVELTVALHAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKGGLSGFTKRSESPYDPFG 118 HSP 2 Score: 31.187 bits (69), Expect = 3.371e-36 Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LG AV RDL Sbjct: 121 HSSTSISAALGFAVARDL 138
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_POLSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dxs PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.372e-36 Identity = 71/112 (63.39%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711 PLL+TIN P ++ L +LK LADELRA V+ +VSKTGGHL S+LG +ELTVALHYVFN P+ ++WDVGHQTYPHKILTGR D+M ++RQ G SG + ES YD FGT Sbjct: 3 PLLETINSPADLRRLPRAQLKALADELRAFVLDSVSKTGGHLSSNLGTVELTVALHYVFNTPEDRLVWDVGHQTYPHKILTGRRDRMGSLRQFGGLSGFPRRDESPYDTFGT 114 HSP 2 Score: 26.1794 bits (56), Expect = 3.372e-36 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 714 HSSTSISARLGMAV 755 HSSTSISA LGMA+ Sbjct: 116 HSSTSISAALGMAL 129 The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bpback to top |