EY649704

Overview
NameEY649704
Unique NameEY649704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas entomophila (strain L48) GN=dxs PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.171e-36
Identity = 68/122 (55.74%), Postives = 89/122 (72.95%), Query Frame = 1
Query:  349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            E   +RP TPLLD  + P  ++ L+  +L+ LADELR D+++ V +TGGH G+ LGVIELT+ALHYVF+ P   ++WDVGHQ YPHKILTGR D+M ++RQ DG +    +SESEYD FG G
Sbjct:    7 EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQDLLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRDRMLSLRQKDGIAAFPRRSESEYDTFGVG 128          

HSP 2 Score: 27.7202 bits (60), Expect = 1.171e-36
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+   L+
Sbjct:  129 HSSTSISAALGMAIAARLQ 147          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.525e-36
Identity = 67/143 (46.85%), Postives = 92/143 (64.34%), Query Frame = 1
Query:  319 GVCASLSERGEYHSQRPP-------------TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            GVC + +   +  S+ P              TPLLDTI  P  ++ L + +L+Q+ADELR + I  VS TGGH G+ LGV+ELT A+HY+F+ P+  ++WDVGHQ YPHKILTGR D++ T+R   G SG   ++ES+YD FG
Sbjct:    2 GVCCATAPASDRRSRHPDMQNWNVAVTDFSKTPLLDTIRTPADLRKLRVEQLRQVADELRKETIDAVSVTGGHFGAGLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFG 144          

HSP 2 Score: 33.8834 bits (76), Expect = 1.525e-36
Identity = 17/22 (77.27%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLKEXK 779
            HSSTSISA LGMAV RDL   K
Sbjct:  147 HSSTSISASLGMAVARDLSGGK 168          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.525e-36
Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1
Query:  367 PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H VFN P+  +++DVGHQ YPHKILTGR D++ T+RQ DG SG   ++ESEYD FG G
Sbjct:    5 PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAG 120          

HSP 2 Score: 27.7202 bits (60), Expect = 1.525e-36
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDL 767
            HSSTSISA LGMAV   L
Sbjct:  121 HSSTSISAGLGMAVAAGL 138          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEMY (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=dxs PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.526e-36
Identity = 66/122 (54.10%), Postives = 90/122 (73.77%), Query Frame = 1
Query:  349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            E   +RP TPLLD+ N P  ++ L+  +L+ LADELR  ++++V ++GGH G+ LGVIELT+ALHYVF+ P   ++WDVGHQ YPHKILTGR ++M ++RQ DG +    +SESEYD FG G
Sbjct:    7 EIPRERPLTPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFGVG 128          

HSP 2 Score: 30.8018 bits (68), Expect = 1.526e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMA+   LK  K+
Sbjct:  129 HSSTSISAALGMAIAARLKGEKR 151          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.987e-36
Identity = 69/112 (61.61%), Postives = 83/112 (74.11%), Query Frame = 1
Query:  373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            TPLLDT+     ++ L   +L QLADELRA+ I  VS TGGHLG+ LGV+ELTVALH+VFN P   ++WDVGHQ YPHKILTGR D++ T+RQ  G SG   +SESEYD FG
Sbjct:    6 TPLLDTVRDASDVRRLPEEKLSQLADELRAETISAVSVTGGHLGAGLGVVELTVALHHVFNTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFG 117          

HSP 2 Score: 32.7278 bits (73), Expect = 1.987e-36
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDL 767
            HSSTSISA LGMAV RDL
Sbjct:  120 HSSTSISAGLGMAVARDL 137          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_POLNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=dxs PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.987e-36
Identity = 71/111 (63.96%), Postives = 85/111 (76.58%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711
            LL+TIN P  ++ L   +LK LADELRA VI +VS+TGGHL S+LG +ELTVALHYVFN P   ++WDVGHQTYPHKILTGR ++M T+RQ  G SG   + ESEYD FGT
Sbjct:    4 LLETINSPADLRRLPRAQLKALADELRAYVIDSVSQTGGHLSSNLGTVELTVALHYVFNTPDDRLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPRRDESEYDTFGT 114          

HSP 2 Score: 28.4906 bits (62), Expect = 1.987e-36
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+  + K
Sbjct:  116 HSSTSISAALGMALAAEFK 134          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.588e-36
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 1
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L   +L QLA ELRA++I  VS TGGHLG+ LGV+ELTVALH+VF+ P   I+WDVGHQ YPHKILTGR D++ T+RQT G SG   ++ESEYD FG
Sbjct:    3 RPTTPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALHHVFDTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFG 117          

HSP 2 Score: 31.9574 bits (71), Expect = 2.588e-36
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  DL   K+
Sbjct:  120 HSSTSISAGLGMAVASDLSGEKR 142          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.588e-36
Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1
Query:  373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            TPLLD + +P  ++ L    L QLA+ELR + I  VS TGGHLG+ LGV+ELTVALHY+FN P+  I+WDVGHQTYPHKILTGR +K+ T+RQ  G SG   + ES YD FG G
Sbjct:    6 TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIFNTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRVESVYDPFGAG 119          

HSP 2 Score: 34.6538 bits (78), Expect = 2.588e-36
Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV   LKE KK
Sbjct:  120 HSSTSISAGLGMAVASALKEEKK 142          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.371e-36
Identity = 69/114 (60.53%), Postives = 84/114 (73.68%), Query Frame = 1
Query:  367 PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            P TPLLD ++ P  MK LS R+L QLADELR++ +  VS TGGHLG+ LGV+ELTVALH VF+ P+  I+WDVGHQ YPHKILT R D++ T+R   G SG   +SES YD FG
Sbjct:    5 PKTPLLDLVHRPADMKGLSDRQLVQLADELRSETVSAVSVTGGHLGAGLGVVELTVALHAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKGGLSGFTKRSESPYDPFG 118          

HSP 2 Score: 31.187 bits (69), Expect = 3.371e-36
Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDL 767
            HSSTSISA LG AV RDL
Sbjct:  121 HSSTSISAALGFAVARDL 138          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_POLSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dxs PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.372e-36
Identity = 71/112 (63.39%), Postives = 86/112 (76.79%), Query Frame = 1
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711
            PLL+TIN P  ++ L   +LK LADELRA V+ +VSKTGGHL S+LG +ELTVALHYVFN P+  ++WDVGHQTYPHKILTGR D+M ++RQ  G SG   + ES YD FGT
Sbjct:    3 PLLETINSPADLRRLPRAQLKALADELRAFVLDSVSKTGGHLSSNLGTVELTVALHYVFNTPEDRLVWDVGHQTYPHKILTGRRDRMGSLRQFGGLSGFPRRDESPYDTFGT 114          

HSP 2 Score: 26.1794 bits (56), Expect = 3.372e-36
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  714 HSSTSISARLGMAV 755
            HSSTSISA LGMA+
Sbjct:  116 HSSTSISAALGMAL 129          
The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_PSEE41.171e-3655.741-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_NITHX1.525e-3646.851-deoxy-D-xylulose-5-phosphate synthase OS=Nitroba... [more]
DXS_AGRT51.525e-3658.621-deoxy-D-xylulose-5-phosphate synthase OS=Agrobac... [more]
DXS_PSEMY1.526e-3654.101-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_AZOC51.987e-3661.611-deoxy-D-xylulose-5-phosphate synthase OS=Azorhiz... [more]
DXS_POLNA1.987e-3663.961-deoxy-D-xylulose-5-phosphate synthase OS=Polarom... [more]
DXS_OCHA42.588e-3660.871-deoxy-D-xylulose-5-phosphate synthase OS=Ochroba... [more]
DXS_BART12.588e-3659.651-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS2_ROSDO3.371e-3660.531-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseo... [more]
DXS_POLSJ3.372e-3663.391-deoxy-D-xylulose-5-phosphate synthase OS=Polarom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bp
CCACGCGTCCGGCACTGAATACATTTACTGTGAGAAGATGACTGACCAGT
CGCGAGTGTTTTTAATTATATACTGATTTGCCGTCGTTAGCATATTATTC
TTCACTCACTGCGTGATGTTTTCTTTTCTGGGTTGTTCTATGCAATAGCT
GTTATGGCTCTCTCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAAC
AAATTCGGGTCCCCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAG
CAGCTCTTTTTTCCCATTTCTCACACAAGCTCGACAATCATCAGATACAG
CTCAAGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGA
GTATCACTCACAAAGACCACCAACACCTCTCTTGGACACCATAAACTATC
CAATTCACATGAAAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGAT
GAGTTGCGGGCCGATGTCATATTCAATGTTTCGAAAACCGGGGGTCACTT
GGGCTCAAGTCTTGGTGTGATTGAGCTTACCGTGGCCCTTCATTATGTTT
TCAATGCTCCCAAAGNACCGATACTGTGGGATGTCGGTCATCAGACTTAC
CCTCATAAAATCTTGACTGGGAGAATGGATAAGATGCATACAATGAGGCA
AACAGATGGCCCTTCTGGGATTCACTAAAAGTCTGAAAGTGAATATGATT
GCTTTGGAACCGGCACAGTTCTACTAGTATCTCTGCCCGATTGGGAATGG
CTGTGGGTAGGGACCTTAAAGAANAAAAAAAATGGGGNTGCTGGTATGGG
GAGGTGGCCTGACTGCAGGCCAGCCTATGAACCTGGACAACGCTGGGACC
TAAATCTGACTGATTGTAATTCTATGAAAACAACGGGTTCTTACCCATGG
TACTTAGATGGCCCATCCACCTGAGGTGCTTGACATGCTCTAACAATGG
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