EY649704

Overview
NameEY649704
Unique NameEY649704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_KLEP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dxs PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.785e-25
Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            P L  ++    ++ L    L +L DELR  ++ +VS++ GH  S LG +ELTVALHYV+N P   ++WDVGHQ YPHKILTGR DK+ T+RQ  G      + ESEYD    G
Sbjct:    9 PTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVG 121          

HSP 2 Score: 24.6386 bits (52), Expect = 5.785e-25
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA +G+A+    KE K+
Sbjct:  122 HSSTSISAGIGVAIAA-AKEDKQ 143          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_KLEP3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Klebsiella pneumoniae (strain 342) GN=dxs PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.785e-25
Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            P L  ++    ++ L    L +L DELR  ++ +VS++ GH  S LG +ELTVALHYV+N P   ++WDVGHQ YPHKILTGR DK+ T+RQ  G      + ESEYD    G
Sbjct:    9 PTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVG 121          

HSP 2 Score: 24.6386 bits (52), Expect = 5.785e-25
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA +G+A+    KE K+
Sbjct:  122 HSSTSISAGIGVAIAA-AKEDKQ 143          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BACSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=dxs PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.522e-25
Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  382 LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            L+ I  P  +KN S ++L++LA ++R  +I  +S TGGH+G +LGV+ELT+ALH +F++PK  +LWDVGHQ Y HKILTGR  +  T+RQ  G  G   ++ESE+D + TG
Sbjct:    3 LEEIQDPSFLKNYSNKQLEELAADIRRFLIEKLSATGGHIGPNLGVVELTLALHQLFDSPKDKLLWDVGHQAYVHKILTGRAPQFDTLRQYKGLCGFPKRTESEHDVWETG 113          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BUCAT (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dxs PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.531e-25
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            P+L   N   +++ LS+ +L QL  ELR  ++  VS + GH  S LGV+E+TVALHYV+N P   +LWD GHQ YPHKILTGR +K++++R+ +G      + ESEYD    G
Sbjct:    9 PILSFANSVENLRLLSVEQLPQLCFELREYLLDVVSISKGHFASGLGVVEITVALHYVYNTPFDNLLWDTGHQAYPHKILTGRGEKINSIRKKNGLHSFPCREESEYDSLSVG 121          

HSP 2 Score: 26.1794 bits (56), Expect = 7.531e-25
Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK-EXKKWGCWYGEVA 809
            HSSTSISA LGM++  + +   +K  C  G+ A
Sbjct:  122 HSSTSISAGLGMSIAAEKEGRNRKTICIIGDGA 154          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BUCAI (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dxs PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.531e-25
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            P+L   N   +++ LS+ +L QL  ELR  ++  VS + GH  S LGV+E+TVALHYV+N P   +LWD GHQ YPHKILTGR +K++++R+ +G      + ESEYD    G
Sbjct:    9 PILSFANSVENLRLLSVEQLPQLCFELREYLLDVVSISKGHFASGLGVVEITVALHYVYNTPFDNLLWDTGHQAYPHKILTGRGEKINSIRKKNGLHSFPCREESEYDSLSVG 121          

HSP 2 Score: 26.1794 bits (56), Expect = 7.531e-25
Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK-EXKKWGCWYGEVA 809
            HSSTSISA LGM++  + +   +K  C  G+ A
Sbjct:  122 HSSTSISAGLGMSIAAEKEGRNRKTICIIGDGA 154          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BUCA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dxs PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.531e-25
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            P+L   N   +++ LS+ +L QL  ELR  ++  VS + GH  S LGV+E+TVALHYV+N P   +LWD GHQ YPHKILTGR +K++++R+ +G      + ESEYD    G
Sbjct:    9 PILSFANSVENLRLLSVEQLPQLCFELREYLLDVVSISKGHFASGLGVVEITVALHYVYNTPFDNLLWDTGHQAYPHKILTGRGEKINSIRKKNGLHSFPCREESEYDSLSVG 121          

HSP 2 Score: 26.1794 bits (56), Expect = 7.531e-25
Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK-EXKKWGCWYGEVA 809
            HSSTSISA LGM++  + +   +K  C  G+ A
Sbjct:  122 HSSTSISAGLGMSIAAEKEGRNRKTICIIGDGA 154          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_SYNS9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9902) GN=dxs PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.791e-25
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 1
Query:  382 LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            L  + +P  +  LS+ EL+ +A ++R   +  VS +GGHLG  LGV+ELT+AL+   +  +  + WDVGHQ YPHK+LTGR +   ++RQ  G +G   +SES +D FG G
Sbjct:    3 LGDLKHPNELHGLSLAELEDVARQIRERHLDVVSTSGGHLGPGLGVVELTIALYQTLDLDRDKVCWDVGHQAYPHKLLTGRFNSFDSLRQQRGVAGYLKRSESRFDHFGAG 113          

HSP 2 Score: 31.5722 bits (70), Expect = 9.791e-25
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRD 764
            H+STSISA LGMA+GRD
Sbjct:  114 HASTSISAALGMALGRD 130          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_MYCA9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=dxs PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.824e-25
Identity = 58/107 (54.21%), Postives = 75/107 (70.09%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYD 699
            +LD I  P  ++ LS REL  LADE+R  +I  V+ TGGHLG +LGV+EL++ALH VF +P  PI++D GHQ Y HKILTGR     T+RQ DG SG   ++ESE+D
Sbjct:    1 MLDDIRGPGDLQGLSKRELDLLADEIREFLIHKVAATGGHLGPNLGVVELSLALHRVFESPYDPIIFDTGHQAYVHKILTGRAGDFDTLRQKDGLSGYPSRAESEHD 107          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_DEIRA (1-deoxy-D-xylulose-5-phosphate synthase OS=Deinococcus radiodurans GN=dxs PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.275e-24
Identity = 55/114 (48.25%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            TPLLD I+ P  +K LS  +L  L +ELR +++   S+ G HL SSLG +++  ALHYV ++P+  IL+DVGHQ Y HKILTGR D+M  +++  G SG    SESE+D    G
Sbjct:   10 TPLLDQIHGPKDLKRLSREQLPALTEELRGEIVRVCSRGGLHLASSLGAVDIITALHYVLDSPRDRILFDVGHQAYAHKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVG 123          

HSP 2 Score: 25.0238 bits (53), Expect = 1.275e-24
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRD 764
            H+STS++  LGMA+ RD
Sbjct:  124 HASTSLANALGMALARD 140          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PROM9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxs PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.275e-24
Identity = 46/112 (41.07%), Postives = 76/112 (67.86%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            LL  +++P  +  L++ +L+++A ++R   +  VS +GGHLG  LGV+ELT+AL+   +     ++WDVGHQ YPHK++TGR  +  ++RQ +G +G   +SES++D FG G
Sbjct:    2 LLSELSHPNELHGLTVSQLEEIACQIRERHLQVVSTSGGHLGPGLGVVELTLALYQTLDLDSDRVVWDVGHQGYPHKLITGRFSQFDSLRQQNGVAGYLKRSESKFDHFGAG 113          

HSP 2 Score: 31.187 bits (69), Expect = 1.275e-24
Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK 770
            H+STSISA LGMA+ RD K
Sbjct:  114 HASTSISAALGMAIARDRK 132          
The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_KLEP75.785e-2547.791-deoxy-D-xylulose-5-phosphate synthase OS=Klebsie... [more]
DXS_KLEP35.785e-2547.791-deoxy-D-xylulose-5-phosphate synthase OS=Klebsie... [more]
DXS_BACSK7.522e-2549.551-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BUCAT7.531e-2546.901-deoxy-D-xylulose-5-phosphate synthase OS=Buchner... [more]
DXS_BUCAI7.531e-2546.901-deoxy-D-xylulose-5-phosphate synthase OS=Buchner... [more]
DXS_BUCA57.531e-2546.901-deoxy-D-xylulose-5-phosphate synthase OS=Buchner... [more]
DXS_SYNS99.791e-2543.241-deoxy-D-xylulose-5-phosphate synthase OS=Synecho... [more]
DXS_MYCA99.824e-2554.211-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_DEIRA1.275e-2448.251-deoxy-D-xylulose-5-phosphate synthase OS=Deinoco... [more]
DXS_PROM91.275e-2441.071-deoxy-D-xylulose-5-phosphate synthase OS=Prochlo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bp
CCACGCGTCCGGCACTGAATACATTTACTGTGAGAAGATGACTGACCAGT
CGCGAGTGTTTTTAATTATATACTGATTTGCCGTCGTTAGCATATTATTC
TTCACTCACTGCGTGATGTTTTCTTTTCTGGGTTGTTCTATGCAATAGCT
GTTATGGCTCTCTCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAAC
AAATTCGGGTCCCCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAG
CAGCTCTTTTTTCCCATTTCTCACACAAGCTCGACAATCATCAGATACAG
CTCAAGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGA
GTATCACTCACAAAGACCACCAACACCTCTCTTGGACACCATAAACTATC
CAATTCACATGAAAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGAT
GAGTTGCGGGCCGATGTCATATTCAATGTTTCGAAAACCGGGGGTCACTT
GGGCTCAAGTCTTGGTGTGATTGAGCTTACCGTGGCCCTTCATTATGTTT
TCAATGCTCCCAAAGNACCGATACTGTGGGATGTCGGTCATCAGACTTAC
CCTCATAAAATCTTGACTGGGAGAATGGATAAGATGCATACAATGAGGCA
AACAGATGGCCCTTCTGGGATTCACTAAAAGTCTGAAAGTGAATATGATT
GCTTTGGAACCGGCACAGTTCTACTAGTATCTCTGCCCGATTGGGAATGG
CTGTGGGTAGGGACCTTAAAGAANAAAAAAAATGGGGNTGCTGGTATGGG
GAGGTGGCCTGACTGCAGGCCAGCCTATGAACCTGGACAACGCTGGGACC
TAAATCTGACTGATTGTAATTCTATGAAAACAACGGGTTCTTACCCATGG
TACTTAGATGGCCCATCCACCTGAGGTGCTTGACATGCTCTAACAATGG
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