EY649704

Overview
NameEY649704
Unique NameEY649704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_STRC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces sp. (strain CL190) GN=dxs PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.958e-21
Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYD 699
            +L+ I  P  +K L   +L +L++E+R  ++  V++TGGHLG +LGV+ELT+ALH VF +P   ILWD GHQ+Y HK+LTGR D    +R   G SG   + ESE+D
Sbjct:    3 ILENIRQPRDLKALPEEQLHELSEEIRQFLVHAVTRTGGHLGPNLGVVELTIALHRVFESPVDRILWDTGHQSYVHKLLTGRQD-FSKLRGKGGLSGYPSREESEHD 108          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RENSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=dxs PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.863e-21
Identity = 52/107 (48.60%), Postives = 75/107 (70.09%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYD 699
            LL+TI +P  +  LS  +L QLA E+R  +I NV++TGGHLG +L V+ELT+A+H VF++P+  I++D GHQ+Y HK++TGR     T+RQ  G SG   + ES +D
Sbjct:    3 LLETIQHPADLARLSDEQLVQLAQEIRDFLISNVAQTGGHLGPNLCVVELTLAIHRVFDSPRDSIIFDTGHQSYVHKLVTGR-QHFSTLRQQGGLSGYADRGESVHD 108          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS2_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Kitasatospora griseola GN=dxs2 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.046e-21
Identity = 52/107 (48.60%), Postives = 75/107 (70.09%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYD 699
            LL  I  P  +  L+  +L +LA+E+RA ++  VSKTGGHLG +LGV+ELT+A+H VF++P+  IL+D GHQ+Y HK+LTGR D    ++   G SG   ++ESE+D
Sbjct:    3 LLTRIRGPRDLDRLTPAQLAELAEEIRAFLVEEVSKTGGHLGPNLGVVELTLAMHRVFDSPRDRILFDTGHQSYVHKLLTGRQD-FSRLKMKGGLSGYPSRAESEHD 108          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_NITSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=dxs PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.801e-21
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 1
Query:  403 IHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            +++KN +I EL++L+ ++R  ++  VSK GGHL S+LG +EL V++HYVF+  K P ++DV HQ Y HK+LT R ++  T+RQ  G SG     ES YD +  G
Sbjct:    1 MNIKNYTIEELEELSQKIRQRILEVVSKNGGHLSSTLGAVELIVSMHYVFDVEKDPFIFDVSHQAYAHKLLTDRWEQFDTLRQFGGISGYTKPKESPYDYWVAG 104          

HSP 2 Score: 21.1718 bits (43), Expect = 5.801e-21
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSIS  +G A    LK
Sbjct:  105 HSSTSISLAVGAAKAIALK 123          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_EXIS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.607e-21
Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1
Query:  382 LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            L  I  P  +K +S+ EL+  A ++R  +I  ++ TGGHL  +LGV+ELT+ALH  F++P    +WDVGHQ Y HKILTGR  +  T+RQ  G  G   ++ES +D + TG
Sbjct:    3 LTEIQDPSFLKRMSVSELELFAGDIRRFLIEELATTGGHLAPNLGVVELTLALHREFDSPNDKFVWDVGHQAYVHKILTGRAGQFDTLRQHKGLCGFPKRNESVHDVWETG 113          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_SULDN (1-deoxy-D-xylulose-5-phosphate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=dxs PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.276e-20
Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 1
Query:  403 IHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            +++K   I+EL+ L   +R +++  VSK GGHL S+LG  E+ VA+H VF++ K P ++DV HQ+Y HK+LTGR DK  T+R+ +G  G    SESE+D F  G
Sbjct:    1 MNIKASRIKELETLCKNIREEILRVVSKNGGHLSSTLGATEIIVAMHEVFDSKKDPFIFDVSHQSYAHKLLTGRWDKFDTLREFNGLCGYTKPSESEHDYFVAG 104          

HSP 2 Score: 20.7866 bits (42), Expect = 1.276e-20
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSIS  +G A    LK
Sbjct:  105 HSSTSISLGVGAAKAIALK 123          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_CLAMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=dxs PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20
Identity = 49/107 (45.79%), Postives = 75/107 (70.09%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYD 699
            +L+TI  P  +  LS  ++ +LA E+R  ++  VSKTGGHLG +LGV+E T+A+H VF++P+  I++D GHQ+Y HK++TGR D    +R+  G +G   +SESE+D
Sbjct:    3 ILETITGPRDLDRLSREQMVELAAEIRQFLVAEVSKTGGHLGPNLGVVETTLAIHRVFDSPRDAIVFDTGHQSYVHKLVTGRQD-FSRLREAGGLAGYPQRSESEHD 108          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_CAMFF (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=dxs PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20
Identity = 47/102 (46.08%), Postives = 69/102 (67.65%), Query Frame = 1
Query:  409 MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            +K+ S+ EL  L D LR  ++  VS  GGHL S++G +EL+VA+HYVF+  K P ++DV HQ+Y HK+LT R ++  ++RQ +G SG    SES++D F  G
Sbjct:    3 IKSKSLEELTDLCDTLRDKILKTVSSNGGHLSSNMGAVELSVAMHYVFDVSKDPFIFDVSHQSYAHKLLTDRWNRFDSLRQFNGISGYTKPSESKFDYFVAG 104          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_CAMHC (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.660e-20
Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 1
Query:  409 MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            +KN ++ EL +L  ++R  ++  VS+ GGHL S++G +EL VA+HYVF+    P ++DV HQ+Y HK+LTGR D+  ++RQ  G SG     ES++D F  G
Sbjct:    3 IKNKNLTELNELCKQIRERILEVVSQNGGHLSSNMGAVELIVAMHYVFDPDSDPFIFDVSHQSYAHKLLTGRWDEFSSLRQLGGISGYTKPKESKFDYFVAG 104          

HSP 2 Score: 21.557 bits (44), Expect = 1.660e-20
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSIS  +G A    LK
Sbjct:  105 HSSTSISLAVGAAKAIKLK 123          
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_CHLTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis GN=dxs PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.270e-20
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGR-MDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            LL  I+ P  +  LS+ +L  L DE+R  +I ++S TGGHL S+LG +ELTVALHYVF++P    ++DVGHQ+Y HK+LTGR  +    +R  +G SG     ES +D F +G
Sbjct:    5 LLPHIHSPQDLHALSLDKLPVLCDEIRNKIIESLSLTGGHLASNLGGVELTVALHYVFSSPDDQFIFDVGHQSYVHKLLTGRNTEAFSNIRHDNGLSGFTTPQESNHDIFFSG 117          
The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_STRC12.958e-2147.661-deoxy-D-xylulose-5-phosphate synthase OS=Strepto... [more]
DXS_RENSM3.863e-2148.601-deoxy-D-xylulose-5-phosphate synthase OS=Renibac... [more]
DXS2_KITGR5.046e-2148.601-deoxy-D-xylulose-5-phosphate synthase 2 OS=Kitas... [more]
DXS_NITSB5.801e-2145.191-deoxy-D-xylulose-5-phosphate synthase OS=Nitrati... [more]
DXS_EXIS28.607e-2145.051-deoxy-D-xylulose-5-phosphate synthase OS=Exiguob... [more]
DXS_SULDN1.276e-2046.151-deoxy-D-xylulose-5-phosphate synthase OS=Sulfuri... [more]
DXS_CLAMS1.468e-2045.791-deoxy-D-xylulose-5-phosphate synthase OS=Claviba... [more]
DXS_CAMFF1.468e-2046.081-deoxy-D-xylulose-5-phosphate synthase OS=Campylo... [more]
DXS_CAMHC1.660e-2044.121-deoxy-D-xylulose-5-phosphate synthase OS=Campylo... [more]
DXS_CHLTR3.270e-2046.901-deoxy-D-xylulose-5-phosphate synthase OS=Chlamyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bp
CCACGCGTCCGGCACTGAATACATTTACTGTGAGAAGATGACTGACCAGT
CGCGAGTGTTTTTAATTATATACTGATTTGCCGTCGTTAGCATATTATTC
TTCACTCACTGCGTGATGTTTTCTTTTCTGGGTTGTTCTATGCAATAGCT
GTTATGGCTCTCTCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAAC
AAATTCGGGTCCCCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAG
CAGCTCTTTTTTCCCATTTCTCACACAAGCTCGACAATCATCAGATACAG
CTCAAGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGA
GTATCACTCACAAAGACCACCAACACCTCTCTTGGACACCATAAACTATC
CAATTCACATGAAAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGAT
GAGTTGCGGGCCGATGTCATATTCAATGTTTCGAAAACCGGGGGTCACTT
GGGCTCAAGTCTTGGTGTGATTGAGCTTACCGTGGCCCTTCATTATGTTT
TCAATGCTCCCAAAGNACCGATACTGTGGGATGTCGGTCATCAGACTTAC
CCTCATAAAATCTTGACTGGGAGAATGGATAAGATGCATACAATGAGGCA
AACAGATGGCCCTTCTGGGATTCACTAAAAGTCTGAAAGTGAATATGATT
GCTTTGGAACCGGCACAGTTCTACTAGTATCTCTGCCCGATTGGGAATGG
CTGTGGGTAGGGACCTTAAAGAANAAAAAAAATGGGGNTGCTGGTATGGG
GAGGTGGCCTGACTGCAGGCCAGCCTATGAACCTGGACAACGCTGGGACC
TAAATCTGACTGATTGTAATTCTATGAAAACAACGGGTTCTTACCCATGG
TACTTAGATGGCCCATCCACCTGAGGTGCTTGACATGCTCTAACAATGG
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