EY649704

Overview
NameEY649704
Unique NameEY649704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. tomato GN=dxs PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.372e-36
Identity = 68/122 (55.74%), Postives = 88/122 (72.13%), Query Frame = 1 
Query:  349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIELT+ALHYVF+ P   ++WDVGHQ YPHKILTGR  +M T+RQ DG +    +SESEYD FG G
Sbjct:    7 EIPRERPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVG 128

HSP 2 Score: 27.7202 bits (60), Expect = 3.372e-36
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+   L+
Sbjct:  129 HSSTSISAALGMAIASRLQ 147
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSE14 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dxs PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.372e-36
Identity = 68/122 (55.74%), Postives = 88/122 (72.13%), Query Frame = 1 
Query:  349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIELT+ALHYVF+ P   ++WDVGHQ YPHKILTGR  +M T+RQ DG +    +SESEYD FG G
Sbjct:    7 EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVG 128

HSP 2 Score: 27.7202 bits (60), Expect = 3.372e-36
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+   L+
Sbjct:  129 HSSTSISAALGMAIASRLQ 147
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.392e-36
Identity = 72/117 (61.54%), Postives = 85/117 (72.65%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            R  TPLLD I  P  ++ L   +L +LADELR + I  VS TGGHLG+ LGV+ELTVALHYVFN P+  I+WDVGHQTYPHKILTGR D++ T+RQ  G SG   +SES YD FG G
Sbjct:    3 RTLTPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVFNTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAG 119

HSP 2 Score: 29.6462 bits (65), Expect = 4.392e-36
Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGM V   LK  K+
Sbjct:  120 HSSTSISAGLGMTVASALKAEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEFS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=dxs PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.392e-36
Identity = 67/122 (54.92%), Postives = 88/122 (72.13%), Query Frame = 1 
Query:  349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            E   +RP TPLLD    P+ ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIELT+ALHYVF+ P   ++WDVGHQ YPHKILTGR ++M T+RQ DG +    ++ESEYD FG G
Sbjct:    7 EIPRKRPSTPLLDRAVTPVGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMGTLRQKDGIAAFPRRAESEYDTFGVG 128

HSP 2 Score: 27.7202 bits (60), Expect = 4.392e-36
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+   L+
Sbjct:  129 HSSTSISAALGMAIAARLQ 147
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRAJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum GN=dxs PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.718e-36
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 1 
Query:  373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF+ P+  ++WDVGHQ YPHKILTGR D++ T+R   G SG   +SES+YD FG
Sbjct:   26 TPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFG 137

HSP 2 Score: 33.4982 bits (75), Expect = 5.718e-36
Identity = 17/22 (77.27%), Postives = 17/22 (77.27%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXK 779
            HSSTSISA LGMAV RDL   K
Sbjct:  140 HSSTSISAGLGMAVARDLSGGK 161
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_PSESM3.372e-3655.741-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_PSE143.372e-3655.741-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_BARQU4.392e-3661.541-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS_PSEFS4.392e-3654.921-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_BRAJA5.718e-3657.141-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrh... [more]
DXS_BRUSU5.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUSI5.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUME5.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUMB5.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUC25.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bp
CCACGCGTCCGGCACTGAATACATTTACTGTGAGAAGATGACTGACCAGT
CGCGAGTGTTTTTAATTATATACTGATTTGCCGTCGTTAGCATATTATTC
TTCACTCACTGCGTGATGTTTTCTTTTCTGGGTTGTTCTATGCAATAGCT
GTTATGGCTCTCTCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAAC
AAATTCGGGTCCCCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAG
CAGCTCTTTTTTCCCATTTCTCACACAAGCTCGACAATCATCAGATACAG
CTCAAGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGA
GTATCACTCACAAAGACCACCAACACCTCTCTTGGACACCATAAACTATC
CAATTCACATGAAAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGAT
GAGTTGCGGGCCGATGTCATATTCAATGTTTCGAAAACCGGGGGTCACTT
GGGCTCAAGTCTTGGTGTGATTGAGCTTACCGTGGCCCTTCATTATGTTT
TCAATGCTCCCAAAGNACCGATACTGTGGGATGTCGGTCATCAGACTTAC
CCTCATAAAATCTTGACTGGGAGAATGGATAAGATGCATACAATGAGGCA
AACAGATGGCCCTTCTGGGATTCACTAAAAGTCTGAAAGTGAATATGATT
GCTTTGGAACCGGCACAGTTCTACTAGTATCTCTGCCCGATTGGGAATGG
CTGTGGGTAGGGACCTTAAAGAANAAAAAAAATGGGGNTGCTGGTATGGG
GAGGTGGCCTGACTGCAGGCCAGCCTATGAACCTGGACAACGCTGGGACC
TAAATCTGACTGATTGTAATTCTATGAAAACAACGGGTTCTTACCCATGG
TACTTAGATGGCCCATCCACCTGAGGTGCTTGACATGCTCTAACAATGG
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