EY649704

Overview
NameEY649704
Unique NameEY649704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.720e-36
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH+VFN P   I+WDVGHQ YPHKILTGR D++ T+RQ  G SG   ++ESEYD FG
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFG 117

HSP 2 Score: 30.4166 bits (67), Expect = 5.720e-36
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV  +L   K+
Sbjct:  120 HSSTSISAGLGMAVASELSGEKR 142
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_LEPCP (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dxs PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.720e-36
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 1 
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711
            PLL  I  P  ++ LS  ELKQLADELR  V+ +VS+TGGHL S+LG +ELTVALH+VF+ P+  ++WDVGHQTYPHKILTGR D+M T+RQ  G SG   + ESEYD FGT
Sbjct:    5 PLLPRIQSPADVRRLSRAELKQLADELREFVLQSVSRTGGHLSSNLGTVELTVALHHVFDTPEDRLVWDVGHQTYPHKILTGRRDRMSTLRQLGGLSGFPRRDESEYDTFGT 116

HSP 2 Score: 28.4906 bits (62), Expect = 5.720e-36
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMA+    K  K+
Sbjct:  118 HSSTSISAALGMALAAQQKGEKR 140
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_METPP (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylibium petroleiphilum (strain PM1) GN=dxs PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.721e-36
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = 1 
Query:  376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711
            PLL TI+ P  ++ LS  ELKQLA ELR  V+ +VS+TGGHL S+LG +ELT+ALH+VFN P+  ++WDVGHQTYPHKILTGR D+M  +RQ  G SG   + ESEYD FGT
Sbjct:    5 PLLSTIDQPADLRGLSRAELKQLAQELRDHVLTSVSQTGGHLSSNLGTVELTIALHHVFNTPQDRLVWDVGHQTYPHKILTGRRDRMAGLRQLGGISGFPRRDESEYDTFGT 116

HSP 2 Score: 28.1054 bits (61), Expect = 5.721e-36
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+   +K
Sbjct:  118 HSSTSISAALGMALAAKIK 136
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.722e-36
Identity = 69/114 (60.53%), Postives = 85/114 (74.56%), Query Frame = 1 
Query:  373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            TPLLDTI  P  ++ L  ++L QLA ELR  ++ +VS+TGGH  S+LG IELT+ALHYV+N P   ++WDVGHQTYPHKILTGR D+MHTMRQ  G +G   + ESEYD FG G
Sbjct:    4 TPLLDTIQIPADLRELDRKQLPQLARELRDFLVDSVSQTGGHFASNLGSIELTIALHYVYNTPDDRLVWDVGHQTYPHKILTGRRDRMHTMRQKGGLAGFPKRDESEYDTFGVG 117

HSP 2 Score: 25.7942 bits (55), Expect = 5.722e-36
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3 
Query:  714 HSSTSISARLGMAV 755
            HSSTSI A LGMAV
Sbjct:  118 HSSTSIGAALGMAV 131
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.451e-36
Identity = 68/117 (58.12%), Postives = 83/117 (70.94%), Query Frame = 1 
Query:  358 SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708
            S RP TPLLD +  P  +K  S  +L QLA ELRA+ +  VS TGGHLG+ LGV+ELTVALH VF+ P+  ++WDVGHQ YPHKILT R D++ T+R  DG SG   +SES YD FG
Sbjct:    2 SDRPHTPLLDQVTRPADLKRFSDAQLTQLAGELRAETVSAVSVTGGHLGAGLGVVELTVALHAVFDTPRDKVIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFG 118

HSP 2 Score: 31.187 bits (69), Expect = 7.451e-36
Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDL 767
            HSSTSISA LG AV RDL
Sbjct:  121 HSSTSISAALGFAVARDL 138
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEF5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dxs PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.452e-36
Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 1 
Query:  349 EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIELT+ALHYVF+ P   ++WDVGHQ YPHKILTGR ++M ++RQ DG +    +SESEYD FG G
Sbjct:    7 EIPRKRPTTPLLDRAQTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMASLRQKDGLAAFPRRSESEYDTFGVG 128

HSP 2 Score: 28.4906 bits (62), Expect = 7.452e-36
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMA+   L+  ++
Sbjct:  129 HSSTSISAALGMAIAARLQNSER 151
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BURP8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dxs PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.453e-36
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 1 
Query:  379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711
            LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ P+  I+WDVGHQTYPHKILTGR D+M T+RQ  G SG   + ES YD FGT
Sbjct:    4 LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDTPRDRIVWDVGHQTYPHKILTGRRDQMSTLRQLGGISGFPKRDESPYDTFGT 114

HSP 2 Score: 30.8018 bits (68), Expect = 7.453e-36
Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLK 770
            HSSTSISA LGMA+G  L+
Sbjct:  116 HSSTSISAALGMAIGSKLR 134
[Close]
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BARHE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae GN=dxs PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.706e-36
Identity = 71/117 (60.68%), Postives = 84/117 (71.79%), Query Frame = 1 
Query:  364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714
            R  TPLLD +  P  ++     +L +LADELRA+ I  VS TGGHLG+ LGVIELTVALHYVFN P+  I+WDVGHQ YPHKILTGR +K+ T+RQ  G SG   +SES YD FG G
Sbjct:    3 RTLTPLLDRVCEPQDLRAFPESDLARLADELRAETIDVVSVTGGHLGAGLGVIELTVALHYVFNTPEDRIIWDVGHQAYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAG 119

HSP 2 Score: 31.187 bits (69), Expect = 9.706e-36
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 3 
Query:  714 HSSTSISARLGMAVGRDLKEXKK 782
            HSSTSISA LGMAV   LK  K+
Sbjct:  120 HSSTSISAGLGMAVASALKAEKR 142
The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_BRUAB5.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUA25.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUA15.720e-3660.001-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_LEPCP5.720e-3662.501-deoxy-D-xylulose-5-phosphate synthase OS=Leptoth... [more]
DXS_METPP5.721e-3661.611-deoxy-D-xylulose-5-phosphate synthase OS=Methyli... [more]
DXS_LARHH5.722e-3660.531-deoxy-D-xylulose-5-phosphate synthase OS=Laribac... [more]
DXS_SILPO7.451e-3658.121-deoxy-D-xylulose-5-phosphate synthase OS=Silicib... [more]
DXS_PSEF57.452e-3654.921-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_BURP87.453e-3661.261-deoxy-D-xylulose-5-phosphate synthase OS=Burkhol... [more]
DXS_BARHE9.706e-3660.681-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bp
CCACGCGTCCGGCACTGAATACATTTACTGTGAGAAGATGACTGACCAGT
CGCGAGTGTTTTTAATTATATACTGATTTGCCGTCGTTAGCATATTATTC
TTCACTCACTGCGTGATGTTTTCTTTTCTGGGTTGTTCTATGCAATAGCT
GTTATGGCTCTCTCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAAC
AAATTCGGGTCCCCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAG
CAGCTCTTTTTTCCCATTTCTCACACAAGCTCGACAATCATCAGATACAG
CTCAAGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGA
GTATCACTCACAAAGACCACCAACACCTCTCTTGGACACCATAAACTATC
CAATTCACATGAAAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGAT
GAGTTGCGGGCCGATGTCATATTCAATGTTTCGAAAACCGGGGGTCACTT
GGGCTCAAGTCTTGGTGTGATTGAGCTTACCGTGGCCCTTCATTATGTTT
TCAATGCTCCCAAAGNACCGATACTGTGGGATGTCGGTCATCAGACTTAC
CCTCATAAAATCTTGACTGGGAGAATGGATAAGATGCATACAATGAGGCA
AACAGATGGCCCTTCTGGGATTCACTAAAAGTCTGAAAGTGAATATGATT
GCTTTGGAACCGGCACAGTTCTACTAGTATCTCTGCCCGATTGGGAATGG
CTGTGGGTAGGGACCTTAAAGAANAAAAAAAATGGGGNTGCTGGTATGGG
GAGGTGGCCTGACTGCAGGCCAGCCTATGAACCTGGACAACGCTGGGACC
TAAATCTGACTGATTGTAATTCTATGAAAACAACGGGTTCTTACCCATGG
TACTTAGATGGCCCATCCACCTGAGGTGCTTGACATGCTCTAACAATGG
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