EY649704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.639e-35 Identity = 63/112 (56.25%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 TPLLDTI P ++ L I +++Q+ADELR + I VS TGGH G+ LGV+ELT A+HYVF+ P+ ++WDVGHQ YPHKILTGR D++ T+R G SG ++ES+YD FG Sbjct: 4 TPLLDTIRTPDDLRKLRIDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFG 115 HSP 2 Score: 32.7278 bits (73), Expect = 3.639e-35 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LGMAV RDL Sbjct: 118 HSSTSISAGLGMAVARDL 135
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.640e-35 Identity = 63/117 (53.85%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 RP TP+LD P ++ L EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALHYV++ P ++WDVGHQ YPHKILTGR ++M T+RQ DG + + ESEYD FG G Sbjct: 12 RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVG 128 HSP 2 Score: 29.6462 bits (65), Expect = 3.640e-35 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLK 770 HSSTSISA LGMAV LK Sbjct: 129 HSSTSISAALGMAVAARLK 147
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.740e-35 Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 TPLLDTI P ++ L + +++Q+ADELR + I VS TGGH G+ LGV+ELT A+HYVF+ P+ ++WDVGHQ YPHKILTGR D++ T+R G SG ++ES+YD FG Sbjct: 4 TPLLDTIRTPEDLRKLRVDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFG 115 HSP 2 Score: 32.7278 bits (73), Expect = 4.740e-35 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LGMAV RDL Sbjct: 118 HSSTSISAGLGMAVARDL 135
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 6.174e-35 Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 TP LD + P +K +SI +L LA E+R +++ VS+TGGHLGSSLGV+ELTVALH VFN+P ++WDVGHQ YPHKILTGR +M T+RQ G SG +SES +D FG G Sbjct: 8 TPHLDRVTGPADLKAMSIADLTALASEVRREIVEVVSQTGGHLGSSLGVVELTVALHAVFNSPGDKLIWDVGHQCYPHKILTGRRSRMLTLRQAGGISGFPKRSESPHDAFGAG 121 HSP 2 Score: 31.9574 bits (71), Expect = 6.174e-35 Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LG AVGR+L Sbjct: 122 HSSTSISAALGFAVGREL 139
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.174e-35 Identity = 64/114 (56.14%), Postives = 86/114 (75.44%), Query Frame = 1 Query: 367 PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 P TPLLD + YP ++ L R+L QLA E+R ++I VS+TGGHLG+ LGV+ELT+A+H VF+ P +++DVGHQ YPHKILTGR D++ T+RQ +G SG ++ESEYD FG Sbjct: 5 PKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVFDTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFG 118 HSP 2 Score: 30.8018 bits (68), Expect = 6.174e-35 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLKE 773 HSSTSISA LGMA+ DL++ Sbjct: 121 HSSTSISAGLGMAIAADLEK 140
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_HAHCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=dxs PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.041e-35 Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 364 RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGTG 714 RP TPLLD I+ P ++ L+ EL QLA ELRA ++++V ++GGH G+ LGV+ELTVALHY FN P+ ++WDVGHQ YPHKILTGR ++M T+RQ DG + + ES YD FG G Sbjct: 14 RPNTPLLDKIDSPAQLRLLNEAELLQLAHELRAFLLYSVGQSGGHFGAGLGVVELTVALHYAFNTPEDRLVWDVGHQAYPHKILTGRREQMLTIRQKDGLAAFPRREESPYDTFGVG 130 HSP 2 Score: 27.7202 bits (60), Expect = 8.041e-35 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLK 770 HSSTSISA LGMA+ L+ Sbjct: 131 HSSTSISAALGMAIAARLQ 149
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_PHEZH (1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium zucineum (strain HLK1) GN=dxs PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.047e-34 Identity = 69/114 (60.53%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 367 PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFG 708 P TPLLDT++ P + LSI +L+QLADE+RA+ I VS+TGGHLG+ LGV+ELTVALH+V+ PK ++WDVGHQ YPHKILTGR D++ T+RQ G SG ++ES+YD FG Sbjct: 3 PVTPLLDTVSSPADTRGLSIAQLRQLADEVRAETIDAVSQTGGHLGAGLGVVELTVALHHVYETPKDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESDYDPFG 116
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.047e-34 Identity = 69/113 (61.06%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 373 TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711 TPLLDTI P ++ L +L QLADELR + I VS TGGHLG+ LGV+ELTVALHYVF+ P ++WDVGHQ YPHKILTGR D++ T+R+ G SG +SES YD FGT Sbjct: 7 TPLLDTIATPTDLRRLKESDLAQLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVFDTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRRAGGLSGFTKRSESVYDPFGT 119 HSP 2 Score: 26.1794 bits (56), Expect = 1.047e-34 Identity = 13/18 (72.22%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDL 767 HSSTSISA LGMA L Sbjct: 121 HSSTSISAGLGMAAATTL 138
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RALEJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia eutropha (strain JMP134) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.048e-34 Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 379 LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711 LL I+ P ++ L REL+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ P ++WDVGHQ+YPHKILTGR ++M+T+RQ G SG +SES+YD FGT Sbjct: 5 LLKKIDAPADLRKLDRRELRTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFHTPDDRVVWDVGHQSYPHKILTGRRERMNTLRQFGGISGFPRRSESQYDTFGT 115 HSP 2 Score: 28.4906 bits (62), Expect = 1.048e-34 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 714 HSSTSISARLGMAVG 758 HSSTSISA LGMA+G Sbjct: 117 HSSTSISAALGMALG 131
BLAST of EY649704 vs. ExPASy Swiss-Prot
Match: DXS_RHOFD (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=dxs PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.048e-34 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 376 PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKXPILWDVGHQTYPHKILTGRMDKMHTMRQTDGPSGIH*KSESEYDCFGT 711 PLL TIN P ++ + +L LADELRA ++ +V+KTGGHL S+LG +ELTVALHYVFN P ++WDVGHQTYPHKILTGR ++M T+RQ G SG + ESEYD FGT Sbjct: 7 PLLHTINDPADLRLVPRAQLGALADELRAYLLHSVAKTGGHLSSNLGTVELTVALHYVFNTPHDRVVWDVGHQTYPHKILTGRRERMATLRQLGGLSGFPQRGESEYDDFGT 118 HSP 2 Score: 27.7202 bits (60), Expect = 1.048e-34 Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 714 HSSTSISARLGMAVGRDLKEXKKW 785 HSSTSISA LGMA+ ++ +++ Sbjct: 120 HSSTSISAALGMALAAKIRGEERY 143 The following BLAST results are available for this feature:
BLAST of EY649704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649704 ID=EY649704; Name=EY649704; organism=Citrus sinensis; type=EST; length=949bpback to top |