EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.752e-33
Identity = 81/167 (48.50%), Postives = 112/167 (67.07%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFR-LND---LEPLVQTCMTTLNSKW 608
            P +LL+  E  SR  G DA + N+ A K +A +LR+SLGPKG+DKML    GDVTITNDGATI++ M++ +  AKL+VE +++QD E+GDGTT  VV+AG+LL +AE LL   IHP  I EGY+ A   A+E L ++  +++ R LN     + L +   TTL SK+
Sbjct:    4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLNSSVARDTLRKIAFTTLASKF 168          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.901e-33
Identity = 78/164 (47.56%), Postives = 104/164 (63.41%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+P I+L   E   R  G DAQ  N++AGKAVA  +RT+LGPKGMDKML    G V +TNDG TIL++MD+D+  A ++VE+S +Q+ E+GDGTT  V+ AG LL QAE LL + +H   IA+GY  A+  A E L   A  +E   +D E L +   T +  K
Sbjct:    8 GQPMIILG--EDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVLEDNA--IEVTEDDRETLTKIAATAMTGK 167          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.401e-33
Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 3
Query:  183 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            +N+SA KAVA  +RTSLGPKGMDKM+Q   GDVTITNDGATIL+QM V +  AK++VELS++QD E GDGTT VVV+AG+LL    +LL  GIHP  I+E ++ A    VE L  ++  V+  L D E L+ +  T+L SK
Sbjct:   33 SNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQ--LGDRETLLNSATTSLCSK 171          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 8.359e-33
Identity = 79/164 (48.17%), Postives = 111/164 (67.68%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G P I+L++  ++S   G +A +AN+ A +A+A+IL+T+ GPKGMDKML    GD+TITN+GATIL++MDV +  AK++V++S+ Q+ E GDGT   V+ AG LL +AEKLL   IHP  I EGY+ A   A E +  IA  V +  +D+E L     T+LNSK
Sbjct:   13 GIPVIILKEGTQRSY--GREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPVSY--DDVEKLKLIAKTSLNSK 172          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 8.359e-33
Identity = 80/167 (47.90%), Postives = 112/167 (67.07%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFR-LND---LEPLVQTCMTTLNSKW 608
            P +LL+  E  SR  G DA + N+ A K +A +LR+SLGPKG+DKML    GDVTITNDGATI++ M++ +  AKL+VE +++QD E+GDGTT  VV+AG+LL +AE LL   IHP  I EGY+ A   A+E L ++  +++ + LN     + L +   TTL SK+
Sbjct:    4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRIDIKDLNSSVARDTLRKIAFTTLASKF 168          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.426e-32
Identity = 74/164 (45.12%), Postives = 109/164 (66.46%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+P  +L++  K+    G DA K N+ A  A++  +R+SLGP+GMDKML    GD+ ITNDG TIL++MDV++  AK+MVE+S++QD  +GDGTT  V++AG LL QA+ L+   +HP  I+EGY MAS  A   +  I+ K+    ++   L++   T+LNSK
Sbjct:    4 GQPIFILKEGTKRES--GKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKI--GADEKALLLKMAQTSLNSK 163          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.426e-32
Identity = 74/152 (48.68%), Postives = 107/152 (70.39%), Query Frame = 3
Query:  150 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            K+R +  + +KAN+ A +AVA  +RTSLGPKGMDKM+++  G++ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV++ G+LL  AEKLL  GIHP  IAE ++ A   AVE L  ++ ++   L D   LV+   T+L+SK
Sbjct:   13 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKRIS--LQDRAELVRAASTSLSSK 162          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.862e-32
Identity = 76/164 (46.34%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+P ++L   E   R  G DAQ+ N+ A + +A  +RT+LGPKGMDKML    GD+ +TNDGATIL+++D+ +  AK+MVE++++QD E GDGTT  VV+AG LL +AE+LL   IHP  I +GY +A+  A E L  IA +V+   +D E L++   T++  K
Sbjct:    6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVD--PDDEETLLKIAATSITGK 165          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.862e-32
Identity = 76/164 (46.34%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+P ++L   E   R  G DAQ+ N+ A + +A  +RT+LGPKGMDKML    GD+ +TNDGATIL+++D+ +  AK+MVE++++QD E GDGTT  VV+AG LL +AE+LL   IHP  I +GY +A+  A E L  IA +V+   +D E L++   T++  K
Sbjct:    6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVD--PDDEETLLKIAATSITGK 165          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.432e-32
Identity = 75/152 (49.34%), Postives = 107/152 (70.39%), Query Frame = 3
Query:  150 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            K++ + L+ +K+N+ A +AVA  +RTSLGPKGMDKM+Q+  G V I+NDG TIL+ M V +  AK++V+LS SQD   GDGTT VV++AGSLL  A+KLL  GIHP  IAE ++ A+  A E +  ++  ++  L+D E L++   T+LNSK
Sbjct:   12 KNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVMDMSKPID--LSDRETLIRAASTSLNSK 161          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
THSA_SULSH3.752e-3348.50Thermosome subunit alpha OS=Sulfolobus shibatae GN... [more]
THS1_HALVO4.901e-3347.56Thermosome subunit 1 OS=Halobacterium volcanii GN=... [more]
TCPD_TAKRU6.401e-3355.32T-complex protein 1 subunit delta OS=Takifugu rubr... [more]
THSB_AERPE8.359e-3348.17Thermosome subunit beta OS=Aeropyrum pernix GN=ths... [more]
THSA_SULSO8.359e-3347.90Thermosome subunit alpha OS=Sulfolobus solfataricu... [more]
THSB_THEAC1.426e-3245.12Thermosome subunit beta OS=Thermoplasma acidophilu... [more]
TCPD_ASHGO1.426e-3248.68T-complex protein 1 subunit delta OS=Ashbya gossyp... [more]
THSA_THEK11.862e-3246.34Thermosome subunit alpha OS=Thermococcus sp. (stra... [more]
THSA_PYRKO1.862e-3246.34Thermosome subunit alpha OS=Pyrococcus kodakaraens... [more]
TCPD_YARLI2.432e-3249.34T-complex protein 1 subunit delta OS=Yarrowia lipo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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