EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH60_RALEJ (60 kDa chaperonin OS=Ralstonia eutropha (strain JMP134) GN=groL PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 35/126 (27.78%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  171 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIA 533
            DA +A +  G   +A  ++ +LGPKG + +L+   G  T+T DG ++ +++++ +++    A+++ E++       GDGTT   V+A S++ +  K +  G++P+ +  G + A   AVE L +++
Sbjct:   10 DAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVAAAVEELKKVS 135          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH60_RALEH (60 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groL PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 35/126 (27.78%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  171 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIA 533
            DA +A +  G   +A  ++ +LGPKG + +L+   G  T+T DG ++ +++++ +++    A+++ E++       GDGTT   V+A S++ +  K +  G++P+ +  G + A   AVE L +++
Sbjct:   10 DAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVAAAVEELKKVS 135          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 37/127 (29.13%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  165 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIA 533
            G  A++A +S    +A  ++ +LGPKG + +L+   G  TIT DG ++ +++++    +N  A+++ E++       GDGTT   V+A S++ +  + +  G++P+ +  G E A   AVE L +++
Sbjct:    9 GDSARQAVISGVNVLADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDTAGDGTTTATVLAQSIVKEGMRYVAAGMNPMDLKRGIEKAVTGAVEELKKLS 135          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH60_NATTJ (60 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groL PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 44/137 (32.12%), Postives = 72/137 (52.55%), Query Frame = 3
Query:  207 VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            +A  L+ +LGPKG + +L    G   ITNDG TI   +D+    +N  A+L+ E++   +   GDGTT   ++A +++ +  K +  G +P+ I +G + A   AVE L + A  VE    D E + Q    + N +
Sbjct:   22 LADTLKVTLGPKGRNVVLDKKFGSPQITNDGVTIARDIDLEDNYENMGAQLVKEVATQTNDVAGDGTTTATILAQAMVNEGIKNVTAGANPMIIRKGIQKAVDRAVEELQKNAVSVE----DKESISQVASISANDE 154          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH60_DEIGD (60 kDa chaperonin OS=Deinococcus geothermalis (strain DSM 11300) GN=groL PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 33/118 (27.97%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  204 AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVE 545
            AVA  ++ +LGP+G + +++   G  TIT DG T+ +++++++++    A+L+ E++   +   GDGTT   V+  +++ +  + +  G +P+ +  G E A   A E + ++A  VE
Sbjct:   21 AVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVELEDKLENIGAQLLKEIASKTNDITGDGTTTATVLGQAIVKEGLRNVAAGANPLALKRGIEKAVAAATEEIKKLAVPVE 138          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH602_VIBPA (60 kDa chaperonin 2 OS=Vibrio parahaemolyticus GN=groL2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 40/148 (27.03%), Postives = 80/148 (54.05%), Query Frame = 3
Query:  171 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNS 602
            DA++  +     +A  ++ +LGPKG + +L    G  TIT DG ++ +++++    +N  A+++ +++   + E GDGTT   V+A S + +  K + +G++P+ +  G + A+  AVE L  ++       +D E + Q    + NS
Sbjct:   11 DARQKMLKGVNLLADAVKVTLGPKGRNVVLDKSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQSFINEGLKAVASGMNPMDLKRGIDKATEAAVEKLREMSKP----CSDKESITQVGSISANS 154          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH602_COREF (60 kDa chaperonin 2 OS=Corynebacterium efficiens GN=groL2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  207 VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVE 545
            +A  ++ +LGPKG + +L+   G  TITNDG TI  ++++++      A+L+ E+++  D   GDGTT   V+A +L+ +  + +  G +P+ I  G E A     E L   A +VE
Sbjct:   22 LADAVKVTLGPKGRNVVLEKAWGAPTITNDGVTIAREIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGSNPMGIKRGIEQAVATVTEKLLESAKEVE 138          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: CH601_ACIC1 (60 kDa chaperonin 1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=groL1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 40/130 (30.77%), Postives = 73/130 (56.15%), Query Frame = 3
Query:  174 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFR 551
            A++A       +A  ++ +LGPKG + +L+   G  TITNDG +I +++++++      A+L+ E+++  D   GDGTT   V+A +L+ +  + +  G +P+ +  G E A+    + L  IA  VE R
Sbjct:   11 ARRALERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQTLVREGLRNVAAGANPMALKRGIEAATERVCQALLEIAKDVETR 140          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
CH60_RALEJ8.994e-1127.7860 kDa chaperonin OS=Ralstonia eutropha (strain JM... [more]
CH60_RALEH8.994e-1127.7860 kDa chaperonin OS=Ralstonia eutropha (strain AT... [more]
CH60_NITEU8.994e-1129.1360 kDa chaperonin OS=Nitrosomonas europaea GN=groL... [more]
CH60_NATTJ8.994e-1132.1260 kDa chaperonin OS=Natranaerobius thermophilus (... [more]
CH60_DEIGD8.994e-1127.9760 kDa chaperonin OS=Deinococcus geothermalis (str... [more]
CH602_VIBPA8.994e-1127.0360 kDa chaperonin 2 OS=Vibrio parahaemolyticus GN=... [more]
CH602_COREF8.994e-1133.3360 kDa chaperonin 2 OS=Corynebacterium efficiens G... [more]
CH601_ACIC18.994e-1130.7760 kDa chaperonin 1 OS=Acidothermus cellulolyticus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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