EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.177e-32
Identity = 76/164 (46.34%), Postives = 108/164 (65.85%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+P ++LR  E   R  G DAQ+ N+ A + +A  +R++LGPKGMDKML    GDV ITNDG TIL+++DV++  AK+++E++++QD E+GDGTT  VV+AG LL +AE+LL   IHP  IA GY  A+  A+E L  IA  +    +D E L +   T +  K
Sbjct:    6 GQPVLILR--EGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIA--IPISKDDDEILKKIATTAMTGK 165          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.149e-32
Identity = 73/152 (48.03%), Postives = 106/152 (69.74%), Query Frame = 3
Query:  150 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            + R +  + + +N+ A ++VA  +RTSLGPKGMDKM+Q+  G+V +TNDGATIL+ + V +  AK++V+LS +QD E GDGTT VV++AGS+L  AEKLL  GIHP  IAE ++ A+   V+ +   A  +E  L+D E L++   T+LNSK
Sbjct:   12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE--LSDRESLLRAATTSLNSK 161          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.418e-32
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            +P ++L   E  SR  G DAQ+ N+ AGK +A  +RT+LGPKGMDKML    GD+ +TNDG TIL++MD+++  AK++VE++++Q+ E+GDGTT  V++AG LL +AE LL   IHP  IA GY  A+  A E L  IA       +D + L++  MT +  K
Sbjct:    6 QPILVL--PEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILDDIAIDA----SDRDTLMKVAMTAMTGK 162          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.418e-32
Identity = 75/160 (46.88%), Postives = 107/160 (66.88%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL-EPLVQTCMT 590
            G+P I++    +  R++  DAQ+ N+SA +AVA  +R++LGPKGMDKML S  GDVT+TNDG TIL++MD+DN  A+++VE++ +Q+ E GDGTT  V +AG LL  AE LL   IHP  I +GY +A+  A E +  +A  V+    DL   + +T MT
Sbjct:    9 GQPMIIMGDDAQ--RVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAREEVDNVAVDVDPDDKDLIRSVAETSMT 166          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.418e-32
Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSKW 608
            G P ++L+  E   R  G +A +AN+ A + +A +L++SLGP+G+DKML    GD+T+TNDGATI+++M++ +  AKL+VE++++QD E+GDGTT VVV+AG+LL +AEKLL   +HP  I EGY  A   A+  +   A  VE  + D   L +   TTL SK+
Sbjct:    5 GYPVLILK--EGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVDEAAVPVE--VEDDSVLRRIAETTLASKF 165          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.077e-32
Identity = 72/163 (44.17%), Postives = 106/163 (65.03%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            +P  +L Q    SR  G +AQ+ N+ AGK +A  +RT+LGPKGMDKML    GD+ ITNDG TIL +MD+ +  AK++VE++++Q+ E+GDGTT  V++AG LL +AEKL+  G+HP  IA GY  A+  A E    I  ++    +D + L++  +T +  K
Sbjct:    6 QPIFILPQDT--SRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQE----ILEEISMEASDRDTLMKVAITAMTGK 162          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.242e-32
Identity = 77/164 (46.95%), Postives = 105/164 (64.02%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            GR  ++L   E   R  G DAQ+ N+ A + VA  +RT+LGP GMDKML    GDV +TNDG TILE+MD+++  AK++VE++++Q+ E+GDGTT  VV+AG LL +AE LL   IHP  IA GY MA   A E L  IA +++   +D E L +   T +  K
Sbjct:    8 GRQVLIL--PEGYQRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKAEEILEEIAEEID--PDDEETLKKIAKTAMTGK 167          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31
Identity = 75/164 (45.73%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G P I+L+  E  SR  G +A + N++A KAV   L+++ GP+GMDKML    GD+TITNDGATIL++MD+ +  AKL+V++++ QD E  DGT   V++AG L+ +AE+LL   IHP  I  G++ A   A++ +  IA KV   +ND++ L +  MT+LNSK
Sbjct:   13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQKVS--VNDMDILKKVAMTSLNSK 172          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31
Identity = 76/164 (46.34%), Postives = 107/164 (65.24%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+P I++   E   R++  DAQ+ N+ A +AVA  +R++LGPKGMDKML    GDVTITNDG TIL++MD+DN  A+++VE++ +Q+ E GDGTT  V +AG LL  AE LL   IHP  I  G+ +AS  A E +  IA +V+   +D E L +   T++  K
Sbjct:    8 GQPMIIMG--EDAQRVKDRDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDDIAERVD--PDDEELLKKVAETSMTGK 167          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31
Identity = 70/152 (46.05%), Postives = 109/152 (71.71%), Query Frame = 3
Query:  150 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            K++ +  + +KAN+ A ++VA  +RTSLGPKGMDKM+++  G++ I+NDG TIL+QM + + +A+++VE+S +QD E GDGTT VV++ G+LL  AE+LL  GIHP  IA+ ++ A+  +V+ L  +  KV   L+D E LV+   T+L+SK
Sbjct:   12 KNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVS--LSDREQLVRAASTSLSSK 161          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
THSB_ARCFU3.177e-3246.34Thermosome subunit beta OS=Archaeoglobus fulgidus ... [more]
TCPD_SCHPO4.149e-3248.03T-complex protein 1 subunit delta OS=Schizosacchar... [more]
THSB_METTH5.418e-3246.01Thermosome subunit beta OS=Methanobacterium thermo... [more]
THSB_HALSA5.418e-3246.88Thermosome subunit beta OS=Halobacterium salinariu... [more]
THSA_AERPE5.418e-3245.45Thermosome subunit alpha OS=Aeropyrum pernix GN=th... [more]
THSA_METTH7.077e-3244.17Thermosome subunit alpha OS=Methanobacterium therm... [more]
THS_METKA9.242e-3246.95Thermosome subunit OS=Methanopyrus kandleri GN=ths... [more]
THSB_SULTO1.207e-3145.73Thermosome subunit beta OS=Sulfolobus tokodaii GN=... [more]
THS2_HALVO1.207e-3146.34Thermosome subunit 2 OS=Halobacterium volcanii GN=... [more]
TCPD_YEAST1.207e-3146.05T-complex protein 1 subunit delta OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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