EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.276e-30
Identity = 69/150 (46.00%), Postives = 102/150 (68.00%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            R  G DA + N+ A +A++ +++T+ GPKGMDKML    GDVTITNDGATIL++ ++ +  AK++V++++SQD E+GDGT   V++AG LL  AE+LL   IHP  I  GY MA   A++ L ++A  ++  LN+ E L +   T+L SK
Sbjct:    2 RTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPID--LNNEELLRKVARTSLTSK 149          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.651e-30
Identity = 72/164 (43.90%), Postives = 105/164 (64.02%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G P I+L+  E  SR  G +A +AN++A KA+   L+++ GP+GMDKM     GD+TITNDGATIL++MD+ +   KL+V++++ QD E  DGT   V++AG L  +AE LL   IHP  I  GY+ A  IA++ +  IA  V   +ND + L +  +T+L SK
Sbjct:   12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQDIAQPVS--INDTDVLRKVALTSLGSK 171          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.130e-29
Identity = 68/145 (46.90%), Postives = 100/145 (68.97%), Query Frame = 3
Query:  171 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            D + +N+ A +AVA  +RTSLGPKGMDKM+ SP+ +V I+NDGATIL+ +++ +  AK++ EL+++QD E GDGTT V V+AGSLL    +L+  GIHP  I+E + +A   ++E L  ++  V   L D   LV++  T+LNSK
Sbjct:   26 DVRTSNIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVL--VSMSVPVSLTDRVSLVKSATTSLNSK 168          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.097e-28
Identity = 71/180 (39.44%), Postives = 102/180 (56.67%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND--LEPLVQTCMTTLNSKWWILATQIAWNWCQT 650
            RP ++L Q  K+    G   Q  N++A K +A I+RT LGPK M KML  P G + +TNDG  IL ++ V +  AK M+E+SR+QD E+GDGTT V+++AG +L  AE  L   +HP  +   Y MA    V  L +I+  V+    D  L  +  +  T + S+W  LA  IA +  +T
Sbjct:    5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMVSTLKKISTPVDVNNRDMMLNIINSSITTKVISRWSSLACNIALDAVKT 182          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.057e-27
Identity = 69/151 (45.70%), Postives = 100/151 (66.23%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHL-XRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            R  G D +  NV A +AV+ I++TSLGP G+DKML    GDVTITNDGATIL  ++V++  AK++VEL+  QD E+GDGTT VV++A  LL +A  L+   IHP  I  GY +A   + +++  ++  KVE +L  + PL+    T+++SK
Sbjct:   14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVE-KLGKV-PLINCAKTSMSSK 162          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.381e-27
Identity = 68/151 (45.03%), Postives = 101/151 (66.89%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHL-XRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            R +G D +  NV+A  A+A I+++SLGP+G+DKML    GDVTITNDGATIL Q++V +  AK++VELS+ QD E+GDGTT VV++A  LL +A +L+   +HP  I  G+++A+  A  ++   +A  VE      E L+    T+++SK
Sbjct:   11 RDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTYIKEHLAISVEEL--GREALINAAKTSMSSK 159          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.356e-27
Identity = 70/170 (41.18%), Postives = 99/170 (58.24%), Query Frame = 3
Query:  129 LLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEF-RLNDLEPLVQTCM-TTLNSKWWILATQIA 632
            +L Q  K+ +  G  AQ AN+ A +AV+ I+RT+LGPK M KML  P G + +TNDG  IL ++DV +  AK M+EL+R+QD E+GDGTT V+++AG +L   E  L   IHP  I   Y  A    V         ++    NDL+ +V +C+ T  +SKW  L   +A
Sbjct:    9 ILNQNAKREQ--GRKAQTANIKAARAVSDIVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENENDLQKIVSSCIGTKFSSKWGNLIVDLA 176          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.356e-27
Identity = 69/180 (38.33%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLE-PLVQTCMTT-LNSKWWILATQIAWNWCQT 650
            RP ++L Q  K+    G   Q  N++A K +A I+RT LGPK M KML  P G + +TNDG  IL ++ V +  AK M+E+SR+QD E+GDGTT V+++AG +L  AE  L   +HP  +   Y MA    +  L +I+  V+    ++   ++ + +TT + S+W  LA  IA +  +T
Sbjct:    5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKKISTPVDVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKT 182          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.018e-27
Identity = 71/183 (38.80%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  114 GRPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK----WWILATQIAWNWCQT 650
            GRP ++L Q  K+    G   Q  N++A K +A I+RT LGP+ M KML  P G + +TNDG  IL ++ V +  AK M+E+SR+QD E+GDGTT V+++AG +L  AE+ L   +HP  I   Y  A    V  L  I+  V+   ND E +++   + +N+K    W  +A  IA +  +T
Sbjct:    3 GRPVLVLSQNMKRES--GRKVQSGNINAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVIISAYRKALDDMVNTLKEISTPVD--TNDRELMLKIINSAINTKAIKLWADMACGIALDAVKT 181          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 3
Query:  147 KKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND-LEPLVQTCM-TTLNSKW 608
            K  R  G  AQ  N+ A +AVA I+R++LGP+ M KML  P G + ITNDG  IL ++DV +  AK M+ELSR+ D E+GDGTT V+++AG +L  AE  + T IHP  I  GY  A   A+      A  V+   ++ ++ LVQ+C+    +S+W
Sbjct:   15 KTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSCIGAKFSSRW 170          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
THSB_DESMO2.276e-3046.00Thermosome subunit beta (Fragment) OS=Desulfurococ... [more]
THSB_SULSH8.651e-3043.90Thermosome subunit beta OS=Sulfolobus shibatae GN=... [more]
TCPD_DICDI1.130e-2946.90T-complex protein 1 subunit delta OS=Dictyostelium... [more]
TCPG_RAT8.097e-2839.44T-complex protein 1 subunit gamma OS=Rattus norveg... [more]
TCPA_ARATH1.057e-2745.70T-complex protein 1 subunit alpha OS=Arabidopsis t... [more]
TCPA_TETPY1.381e-2745.03T-complex protein 1 subunit alpha OS=Tetrahymena p... [more]
TCPG_OXYGR2.356e-2741.18T-complex protein 1 subunit gamma OS=Oxytricha gra... [more]
TCPG_MOUSE2.356e-2738.33T-complex protein 1 subunit gamma OS=Mus musculus ... [more]
TCPG_XENLA4.018e-2738.80T-complex protein 1 subunit gamma OS=Xenopus laevi... [more]
TCPG_THAWE5.248e-2742.95T-complex protein 1 subunit gamma OS=Thalassiosira... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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