EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 66/174 (37.93%), Postives = 105/174 (60.34%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND-LEPLVQTCM-TTLNSKWWILATQIA 632
            +P ++L Q  K+    G  AQ AN+SA KAV+ I+ ++LGP+ M KML  P G + +TNDG  IL ++DV++  AK M+EL+R QD E+GDGTT V++MAG ++  A+  +   IHP  I   Y  A   +++ +  +A  ++   +D +   + +C+ T   S+W  L T +A
Sbjct:    7 QPIMVLNQNTKRES--GKKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEESIKKIEELAVPIDVNNDDQVNKALSSCIGTKFTSRWGKLITDLA 178          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.854e-27
Identity = 69/174 (39.66%), Postives = 98/174 (56.32%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND--LEPLVQTCMTTLNSKWWILATQIA 632
            RP ++L Q  K+    G   Q  N++A K +A I+RT LGPK M KML  P G + +TNDG  IL ++ V +  AK MVE+SR+QD E+GDGTT V+++AG +L  AE  L   +HP  +   Y  A    +  L +I+  V+   +D  L  +  +  T   S+W  LA  IA
Sbjct:    5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMVEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDINDSDMMLNIINSSITTKAISRWSSLACNIA 176          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.952e-27
Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND--LEPLVQTCMTTLNSKWWILATQIAWNWCQT 650
            RP ++L Q  K+    G   Q  N++A K +A I+RT LGPK M KML  P G + +TNDG  IL ++ V +  AK M+E+SR+QD E+GDGTT V+++AG +L  AE  L   +HP  +   Y  A    +  L +I+  V+    D  L  +  +  T + S+W  LA  IA +  +T
Sbjct:    5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKT 182          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4)

HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26
Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND--LEPLVQTCMTTLNSKWWILATQIA 632
            RP ++L Q  K+    G   Q  N++A K +A I+RT LGPK M KML  P G + +TNDG  IL ++ V +  AK M+E+SR+QD E+GDGTT V+++AG +L  AE  L   +HP  +   Y  A    +  L +I+  V+   +D  L  +  +  T   S+W  LA  IA
Sbjct:    5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIA 176          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26
Identity = 64/150 (42.67%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            ++ G D +  NV A  A+A ++++SLGP G+DKML    GDVT+TNDGATIL  +DV++   K++VEL++ QD E+GDGTT VV++A  LL +A +L+   IHP  I  GY +A   AV+ +  +       L   E L+    T+++SK
Sbjct:   16 KISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGK-ESLINVAKTSMSSK 164          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26
Identity = 63/152 (41.45%), Postives = 100/152 (65.79%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL--EPLVQTCMTTLNSK 605
            R  G   +  NV+A  A+A I+++SLGP G+DKML    GDV +TNDGATIL+Q++V++   K++VEL++ QD E+GDGTT VV++A  LL +A++L+   +HP  I  GY +A   AV++   I+  + F  + +  + +V    T+++SK
Sbjct:   15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKY---ISENISFTSDSIGRQSVVNAAKTSMSSK 163          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.527e-26
Identity = 70/157 (44.59%), Postives = 99/157 (63.06%), Query Frame = 3
Query:  141 QEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSKWW 611
            +E   R  G +    N++  K +  +L++SLGPKG+DKML     DVTITNDGATI++ M+V +  AKL++E +++ D E+GDGTT VVV+AG LL +AE LL   IHP  I EGY  A   ++E L  IA K+     D + +     TTL+SK++
Sbjct:    6 REGTQRSTGNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLELLKNIADKIS--PEDRKIVHDLVYTTLSSKFF 159          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.527e-26
Identity = 71/182 (39.01%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND---LEPLVQTCM-TTLNSKWWILATQIAWNWCQT 650
            +P ++L Q  K+    G   Q  N+ AGKA+A ++RT LGP+ M KML  P G + +TNDG  IL ++ V +  AK M+E++R+QD E+GDGTT V+V+AG +L  AE  L   IHP  I   Y  A    V HL +    ++  + D   +  +V+ C+ T    KW  LA +IA +  +T
Sbjct:    6 QPILVLSQNTKRES--GRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHL-QSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVET 184          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.605e-26
Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 3
Query:  141 QEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSKWW 611
            +E   R  G +    N++  K +  +L++SLGPKG+DKML     D+TITNDGATI++ M+V +  AKL++E +++ D E+GDGTT VVV+AG LL +AE LL   IHP  I EGY  A   ++E L  IA K+     D + +     TTL+SK++
Sbjct:    6 REGTQRSTGNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DITITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALSSSLELLKSIADKIS--PEDRKIVHDLVYTTLSSKFF 159          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.443e-26
Identity = 68/180 (37.78%), Postives = 100/180 (55.56%), Query Frame = 3
Query:  117 RPFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND--LEPLVQTCMTTLNSKWWILATQIAWNWCQT 650
            RP ++L Q  K+    G   Q  N++A K +A I+RT LGPK M KML  P G + +TNDG  IL ++ V +  AK M+E+SR+QD E+G GTT V+++AG +L  AE  L   +HP  +   Y  A    +  L +I+  V+   +D  L  +  +  T   S+W  LA  IA +  +T
Sbjct:    5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAVKT 182          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
TCPG_TETPY5.248e-2737.93T-complex protein 1 subunit gamma OS=Tetrahymena p... [more]
TCPG_PONAB6.854e-2739.66T-complex protein 1 subunit gamma OS=Pongo abelii ... [more]
TCPG_BOVIN8.952e-2738.33T-complex protein 1 subunit gamma OS=Bos taurus GN... [more]
TCPG_HUMAN1.169e-2639.08T-complex protein 1 subunit gamma OS=Homo sapiens ... [more]
TCPA_SCHPO1.169e-2642.67T-complex protein 1 subunit alpha OS=Schizosacchar... [more]
TCPA_CAEEL1.169e-2641.45T-complex protein 1 subunit alpha OS=Caenorhabditi... [more]
THSG_SULSO1.527e-2644.59Thermosome subunit gamma OS=Sulfolobus solfataricu... [more]
TCPG_DROME1.527e-2639.01T-complex protein 1 subunit gamma OS=Drosophila me... [more]
THSG_SULSH2.605e-2643.95Thermosome subunit gamma OS=Sulfolobus shibatae GN... [more]
TCPG_MACFA4.443e-2637.78T-complex protein 1 subunit gamma OS=Macaca fascic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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