EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.802e-26
Identity = 64/152 (42.11%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL--EPLVQTCMTTLNSK 605
            R  G   +K NV A  + A  ++TSLGP G+DKML    GDVTITNDGATIL+ +DV++  AK++V+L++ QD E+GDGTT VV++A +LL  A++L+   +HP  +  GY +A   A ++   I   + + +N L    L+    T ++SK
Sbjct:    8 RTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKY---IQEHMAYDVNKLGKAGLINVARTAMSSK 156          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.802e-26
Identity = 62/151 (41.06%), Postives = 98/151 (64.90%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXR-IAXKVEFRLNDLEPLVQTCMTTLNSK 605
            R+ G + +  NV A  A+A I++TS GP G+DKML    G + +TNDGATIL+++D+++  AK++V+LS  QD E+GDGTT VV++A  LL +A +L+   +HP  I  G+ +A   A++++   +A KVE    D   +V    T+++SK
Sbjct:   12 RISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKVETLPKDF--IVNIAKTSMSSK 160          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.898e-26
Identity = 66/162 (40.74%), Postives = 99/162 (61.11%), Query Frame = 3
Query:  153 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLN-DLEPLVQTCM-TTLNSKWWILATQIA 632
            +R  G  AQ +N+ A KAVA ++RT LGP+ M KML  P G V +TNDG  IL +++V +  AK M+EL+R+QD E+GDGTT V+++AG +L  A  LL   IHP+ +   ++ A   A+  +  I   V    N ++  L++TC+ T L ++W  L   +A
Sbjct:   13 NRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLA 174          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.688e-25
Identity = 66/152 (43.42%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  162 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPD----GDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            RG  A+ ++     A+  +++++LGPKGMDK+L S +    G + +TNDGATIL+ + VDN  AK++V++S +QD+E+GDGTT V V+A  LL +AEKL+   IHP  I  GY  A  IA E L +    +E   N  + L++   TTL SK
Sbjct:   15 RGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKK--SSIESGDNIRDDLLKIARTTLGSK 164          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.688e-25
Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            ++ G D +  NV A  AVA ++++SLGP G+DKML    GD T+TNDGATIL  +DV +   K++VEL++ QD EIGDGTT VV++A  LL +A +L+   IHP  I  G+ +A   A+  +  +       L   E L+    T+++SK
Sbjct:   19 KISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGK-ETLINIAKTSMSSK 167          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.761e-25
Identity = 64/164 (39.02%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIA--XKVEFRLNDLEPLVQTCMTTLNSK 605
            P ILL++    S+  G+    +N+SA + +A  +RT+LGP+GMDK++    G  TI+NDGATIL+ +DV +  AK +V++++SQD E+GDGTT V ++A   L Q +  +  G+HP  I   +  A+ +AV  +  IA   K E ++   + L +  MT L+SK
Sbjct:    5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSK 166          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.912e-25
Identity = 62/153 (40.52%), Postives = 99/153 (64.71%), Query Frame = 3
Query:  153 SRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL--EPLVQTCMTTLNSK 605
            +R  G   +  NV A  +++ I+++SLGP G+DKML    GDVT+TNDGATIL  ++V++  AK++VEL++ QD E+GDGTT VV++A  LL  A++L+   IHP  I  GY +A   A ++   I+  +   +++L  + L+    T+++SK
Sbjct:   13 TRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKY---ISEHLTAPVDELGRDSLINIAKTSMSSK 162          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.415e-25
Identity = 63/164 (38.41%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIA--XKVEFRLNDLEPLVQTCMTTLNSK 605
            P ILL++    S+  G+    +N+SA + +A  +RT+LGP+GMDK++    G  TI+NDGATIL+ +DV +  AK +V++++SQD E+GDGTT V ++A   L Q +  +  G+HP  I   +  A+ +AV  +  IA   K + ++   + L +  MT L+SK
Sbjct:    5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSK 166          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 63/164 (38.41%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVE--FRLNDLEPLVQTCMTTLNSK 605
            P ILL++    S+  G+    +N+SA + +A  +RT+LGP+GMDK++    G  TI+NDGATIL+ +DV +  AK +V++++SQD E+GDGTT V ++A   L Q +  +  G+HP  I   +  A+ +AV  +  IA  V+   ++   + L +  MT L+SK
Sbjct:    5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSK 166          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 63/164 (38.41%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVE--FRLNDLEPLVQTCMTTLNSK 605
            P ILL++    S+  G+    +N+SA + +A  +RT+LGP+GMDK++    G  TI+NDGATIL+ +DV +  AK +V++++SQD E+GDGTT V ++A   L Q +  +  G+HP  I   +  A+ +AV  +  IA  V+   ++   + L +  MT L+SK
Sbjct:    5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSK 166          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
TCPA_SCHMA5.802e-2642.11T-complex protein 1 subunit alpha OS=Schistosoma m... [more]
TCPA_DICDI5.802e-2641.06T-complex protein 1 subunit alpha OS=Dictyostelium... [more]
TCPG_SCHPO9.898e-2640.74T-complex protein 1 subunit gamma OS=Schizosacchar... [more]
TCPB_CAEEL1.688e-2543.42T-complex protein 1 subunit beta OS=Caenorhabditis... [more]
TCPA_YEAST1.688e-2542.00T-complex protein 1 subunit alpha OS=Saccharomyces... [more]
TCPH_BOVIN3.761e-2539.02T-complex protein 1 subunit eta OS=Bos taurus GN=C... [more]
TCPA_DROME4.912e-2540.52T-complex protein 1 subunit alpha OS=Drosophila me... [more]
TCPH_MOUSE6.415e-2538.41T-complex protein 1 subunit eta OS=Mus musculus GN... [more]
TCPH_PONAB1.094e-2438.41T-complex protein 1 subunit eta OS=Pongo abelii GN... [more]
TCPH_HUMAN1.094e-2438.41T-complex protein 1 subunit eta OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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