EY649692

Overview
NameEY649692
Unique NameEY649692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  150 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQ-AEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLND--LEPLVQTCMTT 593
            + R  G  AQ +N++A KAVA ++RT LGPK M KML  P G + +TNDG  IL ++DV +  AK M+ELSR+QD E+GDGTT V+++AG +L Q A  L+   IHP+ I +  + A   A+E + +++  V+   ND  ++ L+Q  + T
Sbjct:   12 QERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVE-NDAAMKKLIQASIGT 161          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 67/154 (43.51%), Postives = 100/154 (64.94%), Query Frame = 3
Query:  162 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQS-PDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHL-----XRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            RG +A+ ++     AV  +++++LGPKGMDK+LQS   GD+ +TNDGATIL+ + +DN  AK++V +S+ QD E+GDGTT V V A  LL QAE ++   IHP  I +GY +A+  A++ L        +   +FR +DLE + +   TTL+SK
Sbjct:   17 RGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKFR-SDLENIAR---TTLSSK 166          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 58/122 (47.54%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHL 521
            R  G   +  NV A  ++A I+++SLGP G+DKML    GDVTITNDGATIL+ ++V++  AK++ EL+  QD E+GDGTT VV++A  LL  A++L+   IHP  I  GY +A   AV ++
Sbjct:   11 RTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYI 132          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 59/147 (40.14%), Postives = 91/147 (61.90%), Query Frame = 3
Query:  165 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEPLVQTCMTTLNSK 605
            G+ A + N  A   V   ++TS GP G+DKM     G+V+ITNDGATIL+ M +D+  AK++V+L+  QD+E+GDGTT VV++A SL+ +  KL+ +G+HP  +  GY+MA    V+ + +   K    L   + L     T+++SK
Sbjct:   19 GISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGATILQNMLIDDPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSGYKMAFNECVQFIKKSMSKSTLNLGS-KALRNVVETSISSK 164          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 63/152 (41.45%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL--EPLVQTCMTTLNSK 605
            R  G   +  NV A  ++A I+++SLGP G+DKML    GDVTITNDGATIL+ ++V++  AK++ EL+  QD E+GDGTT VV++A  LL  A++L+   IHP  +  GY +A   AV +   I+  +    ++L  + L+    T+++SK
Sbjct:   11 RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY---ISENLIINTDELGRDCLINAAKTSMSSK 159          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 63/152 (41.45%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL--EPLVQTCMTTLNSK 605
            R  G   +  NV A  ++A I+++SLGP G+DKML    GDVTITNDGATIL+ ++V++  AK++ EL+  QD E+GDGTT VV++A  LL  A++L+   IHP  +  GY +A   AV +   I+  +    ++L  + L+    T+++SK
Sbjct:   11 RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY---ISENLIINTDELGRDCLINAAKTSMSSK 159          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.867e-24
Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHL 521
            R  G   +  NV A  ++A I+++SLGP G+DKML    GDVTITNDGATIL+ ++V++  AK++ EL+  QD E+GDGTT VV++A  LL  A++L+   IHP  +  GY +A   AV ++
Sbjct:   11 RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI 132          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.867e-24
Identity = 64/152 (42.11%), Postives = 95/152 (62.50%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDL--EPLVQTCMTTLNSK 605
            R  G   +  NV A  ++A I+++SLGP G+DKML    GDVTITNDGATIL+ ++V++  AK++ EL+  QD E+GDGTT VV++A  LL  A++L+   IHP  +  GY +A   AV +   I   +    ++L  + L  T  T+++SK
Sbjct:   11 RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY---INENLIINADELGRDCLTNTAKTSMSSK 159          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24
Identity = 63/165 (38.18%), Postives = 104/165 (63.03%), Query Frame = 3
Query:  120 PFILLRQQEKKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHLXRIAXKVEFRLNDLEP---LVQTCMTTLNSK 605
            P +LL+  E     +G      N++A + +  I++T+LGP+GMDK++ + + DVTITNDGAT++  +++ +  A ++V++++SQD E+GDGTT VVV+AG LL +A+ LL  GI P  I +G+  A  +A+  L  ++     + N+ E    L++   T LNSK
Sbjct:    8 PIVLLK--EGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYT-ERDVTITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFSNK-NEEEKRSILLKCAQTALNSK 168          
BLAST of EY649692 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24
Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  156 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLXQAEKLLGTGIHPIRIAEGYEMASXIAVEHL 521
            R  G   +  NV A  ++A I+++SLGP G+DKML    GDVTITNDGATIL+ ++V++  AK++ EL+  QD E+GDGTT VV++A  LL  A++L+   IHP  +  GY +A   AV ++
Sbjct:   11 RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI 132          
The following BLAST results are available for this feature:
BLAST of EY649692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
TCPG_YEAST1.094e-2443.05T-complex protein 1 subunit gamma OS=Saccharomyces... [more]
TCPB_SCHPO1.094e-2443.51Probable T-complex protein 1 subunit beta OS=Schiz... [more]
TCPA_MONDO1.429e-2447.54T-complex protein 1 subunit alpha OS=Monodelphis d... [more]
TCPA_ENCCU1.429e-2440.14T-complex protein 1 subunit alpha OS=Encephalitozo... [more]
TCPA_CRIGR1.429e-2441.45T-complex protein 1 subunit alpha OS=Cricetulus gr... [more]
TCPA_BOVIN1.429e-2441.45T-complex protein 1 subunit alpha OS=Bos taurus GN... [more]
TCPA_HUMAN1.867e-2446.72T-complex protein 1 subunit alpha OS=Homo sapiens ... [more]
TCPA1_MOUSE1.867e-2442.11T-complex protein 1 subunit alpha A OS=Mus musculu... [more]
TCPH_PLAF72.438e-2438.18T-complex protein 1 subunit eta OS=Plasmodium falc... [more]
TCPA_RAT2.438e-2446.72T-complex protein 1 subunit alpha OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649692 ID=EY649692; Name=EY649692; organism=Citrus sinensis; type=EST; length=859bp
AAAAACACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAGTGGAAGGGGG
AGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAATGGCGTTAGC
GTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAGCAAGAAAAGA
AGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGTTTCGGCCGGC
AAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCAAGGGCATGGA
CAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACAAATGATGGTG
CCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATG
GTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATGGTACAACTGG
CGTTGTTGTTATGGCTGGTTCACTTTTANAGCAAGCTGAGAAGCTTTTGG
GAACGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGAAATGGCTTCT
ANAATAGCTGTTGAACATTTANAACGTATAGCTCANAAAGTTGAGTTCCG
GTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACTACTTTAAATT
CAAAATGGTGGATCCTTGCAACCCAAATTGCCTGGAATTGGTGTCAAACC
GGGTTTTGCTGGGGCGACTTTTAAAAGGAAGGAGGTCAATTAATTGATAA
ATACGAAATTGGGGAGGTTGGGACCTGCCAATTGGATTCTGGGCAGGGAT
GGCCCCTAAACCCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNN
NATTGAAAAGCGAAAATGGCATTTTGGCCTCGCCCCTTGGCCCCCCTAAC
ACAAAAAAA
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