EY649690

Overview
NameEY649690
Unique NameEY649690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.064e-30
Identity = 79/226 (34.96%), Postives = 123/226 (54.42%), Query Frame = 3
Query:  207 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGLDLGQMDXANDSGLAAYVAGQXDRSLSWKDVKWLQTSPN-AILVKGV 878
            +++A A+++L K  +D+    A+D  T  EN  AF RI  RPR L D+SK+D  TT+ G +IS PI I+PTA   +A P+GE               +SS+++ S+E++ +  P G R+FQLY+  D +   Q+V+RAE  GFKA+ +T+DTP LG R  D +N+  L   + LK+ + L         +    +        S  W D+  LQ+     I++KG+
Sbjct:    8 DFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRAL-------KEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGI 226          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.621e-29
Identity = 84/265 (31.70%), Postives = 131/265 (49.43%), Query Frame = 3
Query:  144 P*INLSRKQ---STDKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLK---NFQGLDLGQMDXANDSGLA------------AYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            P +  +R Q   S  ++G    + +   IAK + P+  FDY   GAED+ ++   R  F  I F P IL DV+ +     VLG    +P  IAPT   ++ H EGE          G   +LS+ +T ++E++    P G ++FQLY+++DR+    LVRR   AGF  + +TVD P  G R  D++N  ++PP LTL+   +  G      D      LA             Y+    D SL++ D+ W+++  P  ++VKG+
Sbjct:   15 PLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGTVGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGI 279          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.471e-29
Identity = 81/247 (32.79%), Postives = 129/247 (52.23%), Query Frame = 3
Query:  198 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLK-----------NFQGLDLGQMDXAN-----DSGL---AAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            NV +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +   VLG + SMP++I PT +     P+G+          G    LS+ S  S+E++A    G  +FQLYV   R +   +V +A   G+  + LT D    G RE D+ NRF +P   + K           +   +  G    AN      S L   AA ++ Q D S +W+ ++WL+   P+ +LVKG+
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPMSYSAKVVLDGCLHPRWSLDFVRHGMPQLANFVSSQTSSLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGL 252          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27
Identity = 77/226 (34.07%), Postives = 123/226 (54.42%), Query Frame = 3
Query:  207 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGLDLGQMDXANDSGLAAYVAGQXDRSLSWKDVKWLQTSPN-AILVKGV 878
            +++A A+++L K  +D+    A+D  T  +N  AF RI  RPR L DVSKID  TT+ G +I+ PI I+PTA   +A  +GE               +SS+++ +VE++ +  P G+ +FQLYV  D ++  Q+V+R E  GFKA+ +TVD P LG R  + ++   L   + LK+ +          + SGL   ++     S  W D+  LQ+     I++KG+
Sbjct:    8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRS------PGESKSGLPTPLS-MPSSSSCWNDLPLLQSMTRLPIILKGI 226          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 75/251 (29.88%), Postives = 120/251 (47.81%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL-------DLGQMDXANDSG--------------LAAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I++  +Y A A+ KLP+ +FDY   GA  + T++ N +  + I  R RIL +V  + + TTV G ++ MP++++P  +  M    GE          G    LS+ S   +EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G M   +D G                 ++A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGRPHDLGNISKYLGKPTHLEDYIGWLANNFDPSISWKDLEWIREFWKGPMIIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 73/246 (29.67%), Postives = 117/246 (47.56%), Query Frame = 3
Query:  207 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQ-------GLDLGQMDXANDSG--------------LAAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            +Y A AK KLP  +F Y   G+ D+ TL+ N +    +  R R+L D++ + + T + G K++MPI +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G R  D+ +  + P     + FQ        LD+G +   +D G                 ++    D S+SWKD++W++      +++KG+
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKAAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQAMRHPSWALDVGLLGKPHDLGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 74/251 (29.48%), Postives = 119/251 (47.41%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQ-------GLDLGQMDXANDSG--------------LAAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I++  +Y A AK KLP+ +FDY   GA  + TL+ N +  + I  R R+L +V  + + T + G  ++MPI+++P  +  M    GE               LS+ S  S+EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q        L++G +   +D G                 ++A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMTKPDWALNVGLLGRPHDLGNISRYLGKATTLEDYVGWLANNFDPSISWKDLEWIREFWQGPMIIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 77/251 (30.68%), Postives = 121/251 (48.21%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQ-------GLDLGQMDXANDSG-----------LAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I++  +Y A AK +LP  +F Y   GA  ++TL+ N    S I  R ++L +V+ + + T + G K++MP+ +AP  +  M    GE          G   TLS+ S   +EEV S      +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  +     T +  Q        LD+G +   +D G           LA Y+   A   D S+SWKD++W+++     +++KG+
Sbjct:    3 ISSPNDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 78/246 (31.71%), Postives = 118/246 (47.97%), Query Frame = 3
Query:  207 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            +Y A A+ KLP  +F Y   GA  + TL+ N    S I  R R+L ++S++D++T + G K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GLA Y+       D S+SWKD++W++      +++KG+
Sbjct:    8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNGPLRRVLQAMTHPQWAWDVGVMGKPHDLGNISAYRGNPTGLADYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.944e-24
Identity = 72/246 (29.27%), Postives = 119/246 (48.37%), Query Frame = 3
Query:  207 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL-------DLGQMDXANDSG--------------LAAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T + G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KDR  +  ++ RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G +   +D G                 ++    D S+SWKD++W++      +++KG+
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI 253          
The following BLAST results are available for this feature:
BLAST of EY649690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
HAOX2_RAT1.064e-3034.96Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
LLDD2_MYCTU2.621e-2931.70Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
MDLB_PSEPU4.471e-2932.79(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
HAOX2_MOUSE1.878e-2734.07Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD_PSEFS1.218e-2629.88L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBPA1.346e-2529.67L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD_PSEU25.116e-2529.48L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_AZOC55.116e-2530.68L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_PSEMY6.681e-2531.71L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBCM1.944e-2429.27L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649690 ID=EY649690; Name=EY649690; organism=Citrus sinensis; type=EST; length=880bp
TTGTTTCCATGAAACTTATATCTATTTTCTCTTTCTCTTTGCTTTCTATT
TCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATCGTCTTCTCTC
TACTGGTTTCTCTGAATGCACTTTGCTGCGCTGTCTTTGTAAACCTTAGA
TTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGAGATCACAAAT
GTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTGTT
TGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAACA
GGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCTGATTGATGTA
AGCAAAATAGACATGAATACCACTGTCTTGGGCTTCAAGATATCGATGCC
AATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCATCCTGAAGGGG
AGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGACATTG
TCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGACCTGG
CATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTTGCTC
AGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCTAACA
GTTGATACCCCCGAGCTGGGTCGCAGAGAAGCTGACATCAAGAACAGATT
CACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGACCTTG
GNCAGATGGACGANGCAAATGACTCTGGGCTTGCTGCCTATGTTGCTGGT
CAAATNGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAACATC
ACCCAATGCCATTCTGGTGAAGGGTGTACT
back to top