EY649690

Overview
NameEY649690
Unique NameEY649690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.944e-24
Identity = 72/246 (29.27%), Postives = 119/246 (48.37%), Query Frame = 3
Query:  207 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL-------DLGQMDXANDSG--------------LAAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T + G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KDR  +  ++ RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G +   +D G                 ++    D S+SWKD++W++      +++KG+
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.539e-24
Identity = 75/251 (29.88%), Postives = 119/251 (47.41%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_ALCFA (L-lactate dehydrogenase [cytochrome] OS=Alcaligenes faecalis GN=lldD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.331e-24
Identity = 72/251 (28.69%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL-------DLGQMDXANDSG--------------LAAYVAGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I++  +Y   A+++LP  +F Y   GA  + TL+ N +  + +  R R+L D+S++D +  + G K+SMP+ ++P  +  M    GE          G   T+SS S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G R  D  +  + P     +  Q +       D+G +   +D G                 Y+    D S+SWKD++W++      +L+KG+
Sbjct:    3 ISSSTDYRRAAQKRLPPFLFHYIDGGAYAEHTLRRNVDDLAEVALRQRVLKDMSQLDTSIDLFGEKLSMPVALSPVGLTGMYARRGEVQAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDRGFMRNALERAQAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAALRRYAQAVMHPRWAWDVGLLGRPHDLGNISRYLGKPTGLEDYMGYLGANFDPSISWKDLEWIREFWKGPMLIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.656e-24
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    + MP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P    L+ +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLPMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.656e-24
Identity = 75/251 (29.88%), Postives = 117/251 (46.61%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q                  DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISATSDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
BLAST of EY649690 vs. ExPASy Swiss-Prot
Match: LLDD_SALPB (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 3
Query:  192 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPELGRREADIKNRFTLPPFLTLKNFQGL----------------DLGQMD--XANDSGLAAYV---AGQXDRSLSWKDVKWLQTS-PNAILVKGV 878
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++      +++KG+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGI 253          
The following BLAST results are available for this feature:
BLAST of EY649690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_VIBCH1.944e-2429.27L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_ESCF32.539e-2429.88L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ALCFA4.331e-2428.69L-lactate dehydrogenase [cytochrome] OS=Alcaligene... [more]
LLDD_SALCH5.656e-2429.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_CITK85.656e-2429.88L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_SALTY7.387e-2429.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI7.387e-2429.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALSV7.387e-2429.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPK7.387e-2429.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPB7.387e-2429.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-D08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649690 ID=EY649690; Name=EY649690; organism=Citrus sinensis; type=EST; length=880bp
TTGTTTCCATGAAACTTATATCTATTTTCTCTTTCTCTTTGCTTTCTATT
TCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATCGTCTTCTCTC
TACTGGTTTCTCTGAATGCACTTTGCTGCGCTGTCTTTGTAAACCTTAGA
TTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGAGATCACAAAT
GTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTGTT
TGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAACA
GGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCTGATTGATGTA
AGCAAAATAGACATGAATACCACTGTCTTGGGCTTCAAGATATCGATGCC
AATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCATCCTGAAGGGG
AGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGACATTG
TCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGACCTGG
CATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTTGCTC
AGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCTAACA
GTTGATACCCCCGAGCTGGGTCGCAGAGAAGCTGACATCAAGAACAGATT
CACTCTACCACCATTTTTGACATTAAAGAATTTTCAGGGTTTGGACCTTG
GNCAGATGGACGANGCAAATGACTCTGGGCTTGCTGCCTATGTTGCTGGT
CAAATNGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCTTCAAACATC
ACCCAATGCCATTCTGGTGAAGGGTGTACT
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