EY649670

Overview
NameEY649670
Unique NameEY649670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_METVS (Phosphoribosyl-AMP cyclohydrolase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=hisI PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 2
Query:  260 KWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            K D+K L +AIA +     +LM  F ++++L  T+ +    ++S SR+ +W KGE S+N   V ++F DCD D+++++ +  G  CH G  +C++  V
Sbjct:   25 KIDDKELLIAIAIDKYKN-VLMTAFMDKESLKMTLKTGLMHYFSTSRNKIWMKGEESKNVQKVLEVFKDCDGDALLFIVEQTGWACHEGYMSCFHNKV 121          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_METVA (Phosphoribosyl-AMP cyclohydrolase OS=Methanococcus vannielii GN=hisI PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 2
Query:  260 KWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            K D+K L +AIA +     +LM  F ++++L  T+ +    ++S SR+ +W KGE S+N   V ++F DCD D+++++ +  G  CH G  +C++  V
Sbjct:   25 KIDDKELLIAIAIDKYKN-VLMTAFMDKESLKMTLKTGLMHYFSTSRNKIWMKGEESKNVQKVLEVFKDCDGDALLFIVEQTGWACHEGYMSCFHNKV 121          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_STRGC (Phosphoribosyl-AMP cyclohydrolase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=hisI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 34/95 (35.79%), Postives = 55/95 (57.89%), Query Frame = 2
Query:  275 GLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLD 559
            GL  AI  +  S  ++M  + N +A   T +S +  ++SRSR  LW KG TS ++  V+ I  DCD+D+++      G  CHTGS++C++  + D
Sbjct:   13 GLIPAIILDHTSKEVIMLAYLNEEAYQLTRTSGQMWYWSRSRQELWHKGATSGHYQTVKKITADCDQDTLLIEVDQLGAACHTGSKSCFFHIIWD 107          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_STRSV (Phosphoribosyl-AMP cyclohydrolase OS=Streptococcus sanguinis (strain SK36) GN=hisI PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 2
Query:  275 GLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLD 559
            GL  AI  +  S  +LM  + N +A   T +S +  ++SRSR  LW KG TS ++  V+ I  DCD D+++      G  CHTG+++C++  + D
Sbjct:   13 GLIPAIILDHTSKEVLMLAYLNEEAYQLTRTSGQMWYWSRSRQELWHKGATSGHYQTVKKITADCDLDTLLIEVDQLGAACHTGAKSCFFHPIWD 107          
The following BLAST results are available for this feature:
BLAST of EY649670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
HIS3_METVS2.563e-1133.67Phosphoribosyl-AMP cyclohydrolase OS=Methanococcus... [more]
HIS3_METVA2.563e-1133.67Phosphoribosyl-AMP cyclohydrolase OS=Methanococcus... [more]
HIS3_STRGC4.371e-1135.79Phosphoribosyl-AMP cyclohydrolase OS=Streptococcus... [more]
HIS3_STRSV9.739e-1135.79Phosphoribosyl-AMP cyclohydrolase OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649670 ID=EY649670; Name=EY649670; organism=Citrus sinensis; type=EST; length=900bp
AAGTGTTCTTTCATTTTCCCAACTGAAATAATTACCTAAATTCATCTGGG
TATTTCTATTTCAGCTTGATTGTGTGATTTTGAGAAGAATGGCGGTGTCG
TATTCTCAGTGTGTTCAATCTCTGAAAGTTTCTTTGACTGGTAGTGATCG
CTGCAGAGACAATGACATGAAGAGAAATTGTCTTGTGTTTGCCTCTTCTA
CGGAATCAAATTCTAATCCCGTCCTTCAATCAAAAGTTGACAGGCTGCTA
GACAGTGTAAAATGGGACAACAAAGGTTTGGCTGTGGCTATAGCTCAAAA
TGTCGACTCTGGAGCCATATTAATGCAAGGATTTGCAAACAGAGATGCTC
TAGCTACAACCATTTCCTCTCGAAAGGCGACATTCTACAGTCGTTCAAGG
TCAACATTGTGGACAAAGGGAGAGACTTCCCAGAATTTCATCAATGTTCA
GGACATCTTTCTTGATTGTGATCGTGACTCTATTATATACCTTGGAAAAC
CCGATGGGCCTACCTGCCACACAGGGTCAGAAACTTGCTACTACACATCT
GTCCTTGATGCCCTGAAAGATCAGCCGGTTGGTAGCTTCATATCTTTAGC
ACACTGCTGTACTATTTGGTATTCCTGAAGGTGAATTTGATTCCTCTGAC
AGGTTCAAGGAAATAATTTGGCAATGACAACGTTGTACTCGTTAGAGTCC
ACAATTTCCCAGAGAAAAGCAGCATCGGAAAATGGGAAACCTTCTTGGAC
TAAACGATTATTACTCGATAGCAAATTGCTGTGCTCANNAATTCGTGAAG
AAGCAGATGAATTATGCCCGACACTGGGAGAGAATGANGATNATTCACGT
ACTGCCTCTGAATGGCAGATGTGCTGTATATGCCATGGNTTTGCTCCGCT
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