EY649670

Overview
NameEY649670
Unique NameEY649670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_CHLPB (Phosphoribosyl-AMP cyclohydrolase OS=Chlorobium phaeobacteroides (strain BS1) GN=hisI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.339e-19
Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVGSFISLAHCCTIWYS 625
            L++V +D+ GL  AI Q+ +SG +LM  + NR++L  T+ +RKA ++SRSR  LW KGE+S N  +V +I +DCD D+++      G  CH G  +C+Y         +   S +SL  C T+ ++
Sbjct:   12 LETVSFDSNGLVPAIVQDHESGKVLMMAWMNRESLEMTLKNRKACYWSRSRKKLWLKGESSGNMQDVHEILIDCDGDTLLLKVSQKGGACHVGYHSCFY---------RKAKSDLSLEICDTLMFN 128          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_PELPB (Phosphoribosyl-AMP cyclohydrolase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=hisI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.361e-19
Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDAL 565
            L++VK+D++GL  AI Q+ ++G +LM  + N ++L  T+  ++A ++SRSR+ LW KGE+S N   V DI +DCD D+++      G  CH G  +C+Y    +AL
Sbjct:   12 LETVKFDDRGLVPAIVQDQETGKVLMMAWMNLESLQMTLDKKRACYWSRSRNKLWLKGESSGNMQVVHDILIDCDGDTLLLKVSQTGGACHVGYHSCFYRKATEAL 117          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_CHLTE (Phosphoribosyl-AMP cyclohydrolase OS=Chlorobium tepidum GN=hisI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.361e-19
Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLD 559
            L++VK+D+ GL  AI Q+ ++G +LM  + N ++L  T+  +KA ++SRSR+ LW KGE+S N   V DI +DCD D+++      G  CH G  +C+Y   +D
Sbjct:   12 LETVKFDSNGLVPAIVQDHETGKVLMMAWMNLESLKMTLEKKKACYWSRSRNKLWLKGESSGNMQEVHDILIDCDGDTLLLKVSQKGGACHVGYHSCFYRRTVD 115          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_ACISJ (Phosphoribosyl-AMP cyclohydrolase OS=Acidovorax sp. (strain JS42) GN=hisI PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19
Identity = 48/106 (45.28%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSII----YLGKPDGPTCHTGSETCYYTSV 553
            LD VKWD +GL   IAQ   +G +LM  + NR+ALA T    +A +YSRSR  LW KGE S +   V DI LDCD D ++     LG   G  CHTG  +C++ ++
Sbjct:    7 LDQVKWDAQGLVPVIAQEAATGDVLMFAWMNREALAKTAELGRAVYYSRSRGKLWFKGEESGHVQQVHDIRLDCDSDVVLLKVTQLGHEPGIACHTGRHSCFFNAL 112          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS2_STAAN (Histidine biosynthesis bifunctional protein hisIE OS=Staphylococcus aureus (strain N315) GN=hisI PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  269 NKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            +KGL  AI Q+  +  +LM G+ N++A   TI      FYSRS+  LWTKGETS +   V+DI +DCD D+I+    P+GPTCHTGS++C+ T V
Sbjct:    9 SKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEV 103          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS2_STAAM (Histidine biosynthesis bifunctional protein hisIE OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hisI PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  269 NKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            +KGL  AI Q+  +  +LM G+ N++A   TI      FYSRS+  LWTKGETS +   V+DI +DCD D+I+    P+GPTCHTGS++C+ T V
Sbjct:    9 SKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEV 103          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_METBU (Phosphoribosyl-AMP cyclohydrolase OS=Methanococcoides burtonii (strain DSM 6242) GN=hisI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            LD++K+D  GL  AIAQ+  +G +LM  F NR+AL  TI +  A ++SRSR  LW KGE+S +   V ++ +DCD D+II     +G  CHTG  +C+Y ++
Sbjct:    4 LDTLKFDGNGLIGAIAQDNRTGEVLMFAFMNREALEKTIETGIAHYWSRSRQKLWKKGESSGHMQKVHELLIDCDMDAIILKISQEGGACHTGYRSCFYRNI 105          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_CHRVO (Phosphoribosyl-AMP cyclohydrolase OS=Chromobacterium violaceum GN=hisI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSII-YLGKPDGPTCHTGSETCYY 544
            LD VKWD+KGL  AIAQ+  SG +LM  + NR++L  T  +  A ++SRSR  LW KGE S +   V+++ LDCD D I+  + +  G  CHTG E+C+Y
Sbjct:    9 LDEVKWDDKGLVTAIAQDAASGRVLMVAWMNRESLQLTADTGIAHYWSRSRRKLWKKGEESGHLQTVRELRLDCDGDVIVMQIEQIGGIACHTGRESCFY 108          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS2_BACTN (Histidine biosynthesis bifunctional protein hisIE OS=Bacteroides thetaiotaomicron GN=hisI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  275 GLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCY 541
            GL  AI Q+ ++  +LM GF N++A   T+ + K TF+SR+++ LWTKGE S NF++V  I  DCD D+++    P GP CHTG++TC+
Sbjct:   10 GLVPAIIQDNETRKVLMLGFMNKEAYDKTVETGKVTFFSRTKNRLWTKGEESGNFLHVVSIKADCDNDTLLIQADPAGPVCHTGTDTCW 98          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_ZYMMO (Phosphoribosyl-AMP cyclohydrolase OS=Zymomonas mobilis GN=hisI PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 39/99 (39.39%), Postives = 66/99 (66.67%), Query Frame = 2
Query:  263 WDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLD 559
            WD KGL  A+  +  +G +LM    N+++   ++++++ATF+SRSR  +W KGE S + + +Q+I +DCD+D++     P GP CHTG+++C+Y  V D
Sbjct:   15 WDEKGLITAVLTDAKTGLLLMVAHMNKESFELSMATKEATFWSRSRKKIWRKGEESGHVMKIQEIRIDCDQDTLWLKVIPMGPACHTGAQSCFYRLVED 113          
The following BLAST results are available for this feature:
BLAST of EY649670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
HIS3_CHLPB3.339e-1937.30Phosphoribosyl-AMP cyclohydrolase OS=Chlorobium ph... [more]
HIS3_PELPB4.361e-1939.62Phosphoribosyl-AMP cyclohydrolase OS=Pelodictyon p... [more]
HIS3_CHLTE4.361e-1940.38Phosphoribosyl-AMP cyclohydrolase OS=Chlorobium te... [more]
HIS3_ACISJ5.696e-1945.28Phosphoribosyl-AMP cyclohydrolase OS=Acidovorax sp... [more]
HIS2_STAAN5.696e-1948.42Histidine biosynthesis bifunctional protein hisIE ... [more]
HIS2_STAAM5.696e-1948.42Histidine biosynthesis bifunctional protein hisIE ... [more]
HIS3_METBU7.439e-1944.12Phosphoribosyl-AMP cyclohydrolase OS=Methanococcoi... [more]
HIS3_CHRVO7.439e-1947.00Phosphoribosyl-AMP cyclohydrolase OS=Chromobacteri... [more]
HIS2_BACTN7.439e-1946.07Histidine biosynthesis bifunctional protein hisIE ... [more]
HIS3_ZYMMO9.716e-1939.39Phosphoribosyl-AMP cyclohydrolase OS=Zymomonas mob... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649670 ID=EY649670; Name=EY649670; organism=Citrus sinensis; type=EST; length=900bp
AAGTGTTCTTTCATTTTCCCAACTGAAATAATTACCTAAATTCATCTGGG
TATTTCTATTTCAGCTTGATTGTGTGATTTTGAGAAGAATGGCGGTGTCG
TATTCTCAGTGTGTTCAATCTCTGAAAGTTTCTTTGACTGGTAGTGATCG
CTGCAGAGACAATGACATGAAGAGAAATTGTCTTGTGTTTGCCTCTTCTA
CGGAATCAAATTCTAATCCCGTCCTTCAATCAAAAGTTGACAGGCTGCTA
GACAGTGTAAAATGGGACAACAAAGGTTTGGCTGTGGCTATAGCTCAAAA
TGTCGACTCTGGAGCCATATTAATGCAAGGATTTGCAAACAGAGATGCTC
TAGCTACAACCATTTCCTCTCGAAAGGCGACATTCTACAGTCGTTCAAGG
TCAACATTGTGGACAAAGGGAGAGACTTCCCAGAATTTCATCAATGTTCA
GGACATCTTTCTTGATTGTGATCGTGACTCTATTATATACCTTGGAAAAC
CCGATGGGCCTACCTGCCACACAGGGTCAGAAACTTGCTACTACACATCT
GTCCTTGATGCCCTGAAAGATCAGCCGGTTGGTAGCTTCATATCTTTAGC
ACACTGCTGTACTATTTGGTATTCCTGAAGGTGAATTTGATTCCTCTGAC
AGGTTCAAGGAAATAATTTGGCAATGACAACGTTGTACTCGTTAGAGTCC
ACAATTTCCCAGAGAAAAGCAGCATCGGAAAATGGGAAACCTTCTTGGAC
TAAACGATTATTACTCGATAGCAAATTGCTGTGCTCANNAATTCGTGAAG
AAGCAGATGAATTATGCCCGACACTGGGAGAGAATGANGATNATTCACGT
ACTGCCTCTGAATGGCAGATGTGCTGTATATGCCATGGNTTTGCTCCGCT
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