EY649670

Overview
NameEY649670
Unique NameEY649670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_SPHWW (Phosphoribosyl-AMP cyclohydrolase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=hisI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 2
Query:  260 KWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            ++D  GL  A+  +  SG +LM    N +ALA T+ S +ATF+SRSR  LW KGE+S N + V +  +DCD+D+I    +P GP CHTG  +C+Y  +
Sbjct:   14 RYDAAGLVTAVVTDHRSGEVLMLAHMNAEALAATLESGEATFFSRSRGRLWKKGESSGNVMRVVEARIDCDQDAIWLRCEPAGPACHTGERSCFYRRI 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURS3 (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia sp. (strain 383) GN=hisI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 2
Query:  197 STESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            +TE+N+ P         LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:    2 NTETNALPAW-------LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BACCR (Phosphoribosyl-AMP cyclohydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hisI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 2
Query:  269 NKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVL 556
            +KGL  AI     +  +LM  + N +A   T+ +++  FYSRSR +LW KGETS N   VQ ++LDCD+DSI+   K  GP CHTG +TC+Y  ++
Sbjct:    6 SKGLIPAIVIEEGTKDVLMLAYMNEEAYKKTLETKRTWFYSRSRQSLWNKGETSGNVQYVQSLYLDCDQDSIVVNVKQVGPACHTGEKTCFYYQII 101          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BACC2 (Phosphoribosyl-AMP cyclohydrolase OS=Bacillus cereus (strain G9842) GN=hisI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 2
Query:  269 NKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVL 556
            +KGL  AI     +  +LM  + N DA   T+ +++  FYSRSR +LW KGETS N   VQ ++LDCD+DSI+   K  GP CHTG +TC++  ++
Sbjct:    6 SKGLIPAIVIEEGTKEVLMLAYMNEDAYEKTLETKRTWFYSRSRQSLWNKGETSGNVQYVQSLYLDCDQDSIVVNVKQVGPACHTGEKTCFHYQII 101          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS2_XANCP (Histidine biosynthesis bifunctional protein hisIE OS=Xanthomonas campestris pv. campestris GN=hisI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 2
Query:  248 LDSVKWDN-KGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTS------VLDAL-----KDQPVGSF 589
            LD++ W+   GL   I Q+ D+  +LM G+ N +ALA T +  + TF+SRS+  LWTKGE+S N + V  I  DCD D+++   +P GPTCH G  +C+ T+       LDAL      ++P GS+
Sbjct:   12 LDALDWNKGDGLLPVIVQDADNLRVLMLGYMNAEALAVTRARGEVTFFSRSKQRLWTKGESSGNVLRVVAIETDCDADTLLVQARPHGPTCHLGRTSCFPTAPSQFLGSLDALIAEREHERPHGSY 137          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS2_OCEIH (Histidine biosynthesis bifunctional protein hisIE OS=Oceanobacillus iheyensis GN=hisI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYY 544
            ++ +++D KGL  AI Q+  SG +L   + N D++  TI + +  FYSR R  LW KG TS N   V+ I  DCD D+++ L    GP CHTG E+C+Y
Sbjct:    7 IEHLQFDEKGLIPAIVQDHQSGQVLTLAYMNSDSITKTIETNETWFYSRKRQELWNKGATSGNKQTVKQISFDCDADAVLVLVDAQGPACHTGEESCFY 105          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_SPHAL (Phosphoribosyl-AMP cyclohydrolase OS=Sphingopyxis alaskensis GN=hisI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 2
Query:  239 DRLLDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            DR L   ++D  GL  AI  + D+ A+LM    N DA+  T ++ +A F+SRSRS LW KGETS N + + ++ +DCD+D+++   KP GP CHTG  +C+Y  V
Sbjct:    9 DRFLP--RFDAAGLVTAIVVDADTQALLMVAHMNADAIEATRATGQAHFWSRSRSALWRKGETSGNGLTLVEMRVDCDQDALLLRVKPAGPACHTGRRSCFYRRV 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_ROSDO (Phosphoribosyl-AMP cyclohydrolase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 40/103 (38.83%), Postives = 66/103 (64.08%), Query Frame = 2
Query:  251 DSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLD 559
            + + ++  GL  AIAQ+ ++  +LM  + N +++A T+ + + T++SRSR   W KGETS +   + D+ +DCDRD ++ L +  GP CHTG  +C+YT V D
Sbjct:   15 ERLTFNEAGLVPAIAQDAETSEVLMLAWMNAESIARTLRTGRVTYWSRSRQAFWVKGETSGHVQELVDLRIDCDRDCLLVLLRQTGPACHTGRRSCFYTGVRD 117          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_JANSC (Phosphoribosyl-AMP cyclohydrolase OS=Jannaschia sp. (strain CCS1) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 41/100 (41.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:  254 SVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            ++++D  GL   IAQ   +G +LM  + N D++A T+ S + T++SRSR   W KGETS +   + D+ +DCDRD ++ + +  GP CHT    C+YTSV
Sbjct:    8 TLRYDVNGLIPCIAQQEGTGEVLMMAWMNADSVARTLESGRVTYWSRSRQAFWVKGETSGHVQELVDLRVDCDRDCLLAVVRQTGPACHTNRRVCFYTSV 107          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_DIAST (Phosphoribosyl-AMP cyclohydrolase OS=Diaphorobacter sp. (strain TPSY) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSII----YLGKPDGPTCHTGSETCYYTSV 553
            LD +KWD +GL   IAQ   +G +LM  + NR+ALA T    +A +YSRSR  LW KGE S +   V DI LDCD D ++     LG   G  CHTG  +C++ ++
Sbjct:    7 LDQLKWDAQGLVPVIAQEAATGDVLMFAWMNREALAKTAELGRAVYYSRSRGKLWFKGEESGHVQQVHDIRLDCDSDVVLLKVTQLGHEPGIACHTGRHSCFFNAL 112          
The following BLAST results are available for this feature:
BLAST of EY649670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
HIS3_SPHWW9.716e-1943.88Phosphoribosyl-AMP cyclohydrolase OS=Sphingomonas ... [more]
HIS3_BURS39.716e-1940.17Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_BACCR9.716e-1944.79Phosphoribosyl-AMP cyclohydrolase OS=Bacillus cere... [more]
HIS3_BACC29.716e-1944.79Phosphoribosyl-AMP cyclohydrolase OS=Bacillus cere... [more]
HIS2_XANCP9.716e-1940.48Histidine biosynthesis bifunctional protein hisIE ... [more]
HIS2_OCEIH9.716e-1942.42Histidine biosynthesis bifunctional protein hisIE ... [more]
HIS3_SPHAL1.269e-1843.81Phosphoribosyl-AMP cyclohydrolase OS=Sphingopyxis ... [more]
HIS3_ROSDO1.269e-1838.83Phosphoribosyl-AMP cyclohydrolase OS=Roseobacter d... [more]
HIS3_JANSC1.269e-1841.00Phosphoribosyl-AMP cyclohydrolase OS=Jannaschia sp... [more]
HIS3_DIAST1.269e-1844.34Phosphoribosyl-AMP cyclohydrolase OS=Diaphorobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649670 ID=EY649670; Name=EY649670; organism=Citrus sinensis; type=EST; length=900bp
AAGTGTTCTTTCATTTTCCCAACTGAAATAATTACCTAAATTCATCTGGG
TATTTCTATTTCAGCTTGATTGTGTGATTTTGAGAAGAATGGCGGTGTCG
TATTCTCAGTGTGTTCAATCTCTGAAAGTTTCTTTGACTGGTAGTGATCG
CTGCAGAGACAATGACATGAAGAGAAATTGTCTTGTGTTTGCCTCTTCTA
CGGAATCAAATTCTAATCCCGTCCTTCAATCAAAAGTTGACAGGCTGCTA
GACAGTGTAAAATGGGACAACAAAGGTTTGGCTGTGGCTATAGCTCAAAA
TGTCGACTCTGGAGCCATATTAATGCAAGGATTTGCAAACAGAGATGCTC
TAGCTACAACCATTTCCTCTCGAAAGGCGACATTCTACAGTCGTTCAAGG
TCAACATTGTGGACAAAGGGAGAGACTTCCCAGAATTTCATCAATGTTCA
GGACATCTTTCTTGATTGTGATCGTGACTCTATTATATACCTTGGAAAAC
CCGATGGGCCTACCTGCCACACAGGGTCAGAAACTTGCTACTACACATCT
GTCCTTGATGCCCTGAAAGATCAGCCGGTTGGTAGCTTCATATCTTTAGC
ACACTGCTGTACTATTTGGTATTCCTGAAGGTGAATTTGATTCCTCTGAC
AGGTTCAAGGAAATAATTTGGCAATGACAACGTTGTACTCGTTAGAGTCC
ACAATTTCCCAGAGAAAAGCAGCATCGGAAAATGGGAAACCTTCTTGGAC
TAAACGATTATTACTCGATAGCAAATTGCTGTGCTCANNAATTCGTGAAG
AAGCAGATGAATTATGCCCGACACTGGGAGAGAATGANGATNATTCACGT
ACTGCCTCTGAATGGCAGATGTGCTGTATATGCCATGGNTTTGCTCCGCT
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