EY649670

Overview
NameEY649670
Unique NameEY649670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_POLNA (Phosphoribosyl-AMP cyclohydrolase OS=Polaromonas naphthalenivorans (strain CJ2) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSII----YLGKPDGPTCHTGSETCYYTSVLD 559
            LD+V+WD+KGL   IAQ   SG +LM  + NR+AL  T    +A ++SRSR  LW KGE S +   V +I LDCD D ++     LG   G  CHTG  +C+++   D
Sbjct:    4 LDTVRWDDKGLVPVIAQEAASGDVLMFAWMNREALQKTAELGQAVYFSRSRGRLWHKGEESGHLQTVHEIRLDCDSDVVLLKVTQLGHEPGIACHTGRHSCFFSLYKD 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_PELTS (Phosphoribosyl-AMP cyclohydrolase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYY 544
            LDS+K++  GL  AI Q+  +GA+LM  + NR+AL  T+++ +  F+SRSR   W KGETS N   V+++  DCDRD+++   +  G  CH G  +C++
Sbjct:    5 LDSLKYNEAGLVPAIVQDAGTGAVLMMAYMNREALEKTLATGETWFWSRSRKAFWHKGETSGNVQRVKEVLYDCDRDTLLVKVEQHGAACHEGYYSCFH 103          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_MICLC (Phosphoribosyl-AMP cyclohydrolase OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  230 SKVDRLLDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCY 541
            S  D L+ SV +D++GL  AIAQ   +G +LM  + N ++L  T+ +  AT++SRSR  LW KGETS +   V+ +  DCD D+++      GP CHTG+ TC+
Sbjct:    4 SPPDDLVASVTFDDRGLVPAIAQQEGTGEVLMMAWMNAESLRATLETGWATYWSRSRGELWRKGETSGHLQRVRAVHADCDGDTLLLTVDQTGPACHTGTRTCF 107          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_MAGSA (Phosphoribosyl-AMP cyclohydrolase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  245 LLDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTS 550
            +L  +K++  GL  AIAQ  D+G +LM  + N +++A T+++ +  ++SRSR  LW KGETS     ++D  +DCD D+I+     DG  CHTG  TC+YT+
Sbjct:    9 VLAKIKFNADGLVPAIAQQHDTGEVLMMAWMNAESVAETLATGRVCYFSRSRGGLWRKGETSGQQQRLKDFLIDCDGDTILLKVDQDGVACHTGRRTCFYTA 110          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_HALWD (Phosphoribosyl-AMP cyclohydrolase OS=Haloquadratum walsbyi (strain DSM 16790) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 42/99 (42.42%), Postives = 67/99 (67.68%), Query Frame = 2
Query:  257 VKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            +++++ GL  AIAQ+ DSG +LM  + +  AL  T  + +A +YSRSR  LW KGETS +  ++++I  DCD D+I+YL +  G  CHTG ++C+Y ++
Sbjct:   17 IRFNSDGLVPAIAQDADSGEVLMLAYVSPTALKRTRETGQAHYYSRSREELWKKGETSGHTQHIREIRADCDADTILYLVEQTGGACHTGHQSCFYRTL 115          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_HALSA (Phosphoribosyl-AMP cyclohydrolase OS=Halobacterium salinarium GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 2
Query:  266 DNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            D  GL   IAQ+ DS  +LM  +A R+A+A T ++ +A +YSRSR  LW KG TS N  +V +I +DCD D+++YL    G  CHTG E+C++ ++
Sbjct:   18 DGDGLVAVIAQDADSRDVLMLAYATREAVARTATTGRAHYYSRSRDELWEKGATSGNTQSVDEIRVDCDGDALLYLVAQTGGACHTGHESCFHRTL 113          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_HALS3 (Phosphoribosyl-AMP cyclohydrolase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 2
Query:  266 DNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            D  GL   IAQ+ DS  +LM  +A R+A+A T ++ +A +YSRSR  LW KG TS N  +V +I +DCD D+++YL    G  CHTG E+C++ ++
Sbjct:   18 DGDGLVAVIAQDADSRDVLMLAYATREAVARTATTGRAHYYSRSRDELWEKGATSGNTQSVDEIRVDCDGDALLYLVAQTGGACHTGHESCFHRTL 113          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_CORJK (Phosphoribosyl-AMP cyclohydrolase OS=Corynebacterium jeikeium (strain K411) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/116 (37.07%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  194 SSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCY 541
            S T  N++P        + + V+++  GL  AI Q++ +G +LM  + N  ALA T++++K T++SRSR + W KGETS +   V+++ LDCD D+++   +  G  CHTG+ TC+
Sbjct:    6 SKTGPNTDPATCELDPAIAERVRFNADGLVPAIVQDITNGDVLMMAWMNDHALAHTLATKKGTYWSRSRQSYWIKGETSGHTQRVEEVRLDCDGDTVLLKIEQTGAACHTGNRTCF 121          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURM1 (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hisI PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURCM (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
The following BLAST results are available for this feature:
BLAST of EY649670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
HIS3_POLNA2.165e-1843.52Phosphoribosyl-AMP cyclohydrolase OS=Polaromonas n... [more]
HIS3_PELTS2.165e-1841.41Phosphoribosyl-AMP cyclohydrolase OS=Pelotomaculum... [more]
HIS3_MICLC2.165e-1842.31Phosphoribosyl-AMP cyclohydrolase OS=Micrococcus l... [more]
HIS3_MAGSA2.165e-1841.18Phosphoribosyl-AMP cyclohydrolase OS=Magnetospiril... [more]
HIS3_HALWD2.165e-1842.42Phosphoribosyl-AMP cyclohydrolase OS=Haloquadratum... [more]
HIS3_HALSA2.165e-1844.79Phosphoribosyl-AMP cyclohydrolase OS=Halobacterium... [more]
HIS3_HALS32.165e-1844.79Phosphoribosyl-AMP cyclohydrolase OS=Halobacterium... [more]
HIS3_CORJK2.165e-1837.07Phosphoribosyl-AMP cyclohydrolase OS=Corynebacteri... [more]
HIS3_BURM12.165e-1843.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_BURCM2.165e-1843.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649670 ID=EY649670; Name=EY649670; organism=Citrus sinensis; type=EST; length=900bp
AAGTGTTCTTTCATTTTCCCAACTGAAATAATTACCTAAATTCATCTGGG
TATTTCTATTTCAGCTTGATTGTGTGATTTTGAGAAGAATGGCGGTGTCG
TATTCTCAGTGTGTTCAATCTCTGAAAGTTTCTTTGACTGGTAGTGATCG
CTGCAGAGACAATGACATGAAGAGAAATTGTCTTGTGTTTGCCTCTTCTA
CGGAATCAAATTCTAATCCCGTCCTTCAATCAAAAGTTGACAGGCTGCTA
GACAGTGTAAAATGGGACAACAAAGGTTTGGCTGTGGCTATAGCTCAAAA
TGTCGACTCTGGAGCCATATTAATGCAAGGATTTGCAAACAGAGATGCTC
TAGCTACAACCATTTCCTCTCGAAAGGCGACATTCTACAGTCGTTCAAGG
TCAACATTGTGGACAAAGGGAGAGACTTCCCAGAATTTCATCAATGTTCA
GGACATCTTTCTTGATTGTGATCGTGACTCTATTATATACCTTGGAAAAC
CCGATGGGCCTACCTGCCACACAGGGTCAGAAACTTGCTACTACACATCT
GTCCTTGATGCCCTGAAAGATCAGCCGGTTGGTAGCTTCATATCTTTAGC
ACACTGCTGTACTATTTGGTATTCCTGAAGGTGAATTTGATTCCTCTGAC
AGGTTCAAGGAAATAATTTGGCAATGACAACGTTGTACTCGTTAGAGTCC
ACAATTTCCCAGAGAAAAGCAGCATCGGAAAATGGGAAACCTTCTTGGAC
TAAACGATTATTACTCGATAGCAAATTGCTGTGCTCANNAATTCGTGAAG
AAGCAGATGAATTATGCCCGACACTGGGAGAGAATGANGATNATTCACGT
ACTGCCTCTGAATGGCAGATGTGCTGTATATGCCATGGNTTTGCTCCGCT
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