EY649670

Overview
NameEY649670
Unique NameEY649670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURCJ (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA T+ +R+A +YSRSR  LW KGE S +  ++ ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTVETRRAVYYSRSRKRLWFKGEESGHVQHLHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURCH (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia cenocepacia (strain HI2424) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURCC (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia cenocepacia (strain MC0-3) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURCA (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia cenocepacia (strain AU 1054) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_BURA4 (Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ambifaria (strain MC40-6) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYY 544
            LD V+WD+ GL   IAQ   +  +LM  + NR+ALA TI +++A +YSRSR  LW KGE S +  +V ++ LDCD D ++  + +  G  CHTG  +C++
Sbjct:   12 LDKVRWDDNGLVPVIAQEASTNDVLMFAWMNREALAKTIETQRAVYYSRSRKRLWFKGEESGHVQHVHEVRLDCDEDVVLLKVEQVSGIACHTGRHSCFF 111          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_ACIAC (Phosphoribosyl-AMP cyclohydrolase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSII----YLGKPDGPTCHTGSETCYYTSVLD 559
            LD VKWD +GL   IAQ   +G +LM  + NR+ALA T    +A ++SRSR  LW KGE S +   V +I LDCD D ++     LG   G  CHTG  +C+++ + D
Sbjct:   16 LDEVKWDAQGLVPVIAQEAATGDVLMFAWMNREALAKTAELGRAVYFSRSRGRLWFKGEESGHVQTVHEIRLDCDNDVVLLKVTQLGHEPGIACHTGRHSCFFSVLKD 123          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS2_CAMJE (Histidine biosynthesis bifunctional protein hisIE OS=Campylobacter jejuni GN=hisI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:  245 LLDSVKWDN-KGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCY 541
            L + + W     L   I Q+  +  +LM GF N +AL  ++ S K  F+SR++  LW KGE S NF+N+ D+ LDCD D+++ L  P GPTCHTG  +C+
Sbjct:    7 LNEKIAWQKVDNLLPVIIQDAKTCEVLMLGFMNNEALEKSLESGKVVFFSRTKQRLWMKGEESGNFLNIIDLSLDCDNDTLLILANPVGPTCHTGDISCF 106          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_PARDP (Phosphoribosyl-AMP cyclohydrolase OS=Paracoccus denitrificans (strain Pd 1222) GN=hisI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  254 SVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV 553
            S+K+D  GL  AIAQ+  SG +LM  + N +A+  T+ S + T++SRSR   W KGE+S +   + ++ +DCDRD ++ L    GP CHT   +C+YT++
Sbjct:    6 SLKYDANGLIPAIAQDHQSGEVLMMAWMNAEAVRQTLDSGRVTYWSRSRQGFWVKGESSGHVQKLVELRVDCDRDCLLLLVDQTGPACHTNRRSCFYTAI 105          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_MARAV (Phosphoribosyl-AMP cyclohydrolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=hisI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 44/105 (41.90%), Postives = 67/105 (63.81%), Query Frame = 2
Query:  248 LDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIY-LGKPDGPTCHTGSETCYYTSVLD 559
            LD ++W   GL  AIAQ+ D+G ILM  + NR++L  T+   +A ++SRSR  LW KGE+S +   ++DI LDCD D ++  + +  G  CHTG  +C+Y ++ D
Sbjct:   14 LDDIQWTEDGLVPAIAQDADNGDILMMAWMNRESLRLTVEEGQAVYWSRSRGKLWRKGESSGHQQVLRDIRLDCDADVVLLKVEQKGGIACHTGRRSCFYRTLKD 118          
BLAST of EY649670 vs. ExPASy Swiss-Prot
Match: HIS3_HALHL (Phosphoribosyl-AMP cyclohydrolase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=hisI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  245 LLDSVKWDNKGLAVAIAQNVDSGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYY 544
            +LD++ +++ GL  AIAQ  DS  +LM  + NR AL  T+ + +  +YSRSR TLW KGE+S    ++ ++ LDCD D+++      GP CHTG  +C+Y
Sbjct:   19 VLDTLPFNSDGLLPAIAQQHDSNEVLMLAWMNRQALEETLQTGRVCYYSRSRGTLWRKGESSGQVQHLHELRLDCDGDTLLLRVDQQGPACHTGRRSCFY 118          
The following BLAST results are available for this feature:
BLAST of EY649670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
HIS3_BURCJ2.165e-1842.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_BURCH2.165e-1843.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_BURCC2.165e-1843.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_BURCA2.165e-1843.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_BURA42.165e-1843.00Phosphoribosyl-AMP cyclohydrolase OS=Burkholderia ... [more]
HIS3_ACIAC2.165e-1843.52Phosphoribosyl-AMP cyclohydrolase OS=Acidovorax av... [more]
HIS2_CAMJE2.165e-1842.00Histidine biosynthesis bifunctional protein hisIE ... [more]
HIS3_PARDP2.827e-1841.00Phosphoribosyl-AMP cyclohydrolase OS=Paracoccus de... [more]
HIS3_MARAV2.827e-1841.90Phosphoribosyl-AMP cyclohydrolase OS=Marinobacter ... [more]
HIS3_HALHL2.827e-1842.00Phosphoribosyl-AMP cyclohydrolase OS=Halorhodospir... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649670 ID=EY649670; Name=EY649670; organism=Citrus sinensis; type=EST; length=900bp
AAGTGTTCTTTCATTTTCCCAACTGAAATAATTACCTAAATTCATCTGGG
TATTTCTATTTCAGCTTGATTGTGTGATTTTGAGAAGAATGGCGGTGTCG
TATTCTCAGTGTGTTCAATCTCTGAAAGTTTCTTTGACTGGTAGTGATCG
CTGCAGAGACAATGACATGAAGAGAAATTGTCTTGTGTTTGCCTCTTCTA
CGGAATCAAATTCTAATCCCGTCCTTCAATCAAAAGTTGACAGGCTGCTA
GACAGTGTAAAATGGGACAACAAAGGTTTGGCTGTGGCTATAGCTCAAAA
TGTCGACTCTGGAGCCATATTAATGCAAGGATTTGCAAACAGAGATGCTC
TAGCTACAACCATTTCCTCTCGAAAGGCGACATTCTACAGTCGTTCAAGG
TCAACATTGTGGACAAAGGGAGAGACTTCCCAGAATTTCATCAATGTTCA
GGACATCTTTCTTGATTGTGATCGTGACTCTATTATATACCTTGGAAAAC
CCGATGGGCCTACCTGCCACACAGGGTCAGAAACTTGCTACTACACATCT
GTCCTTGATGCCCTGAAAGATCAGCCGGTTGGTAGCTTCATATCTTTAGC
ACACTGCTGTACTATTTGGTATTCCTGAAGGTGAATTTGATTCCTCTGAC
AGGTTCAAGGAAATAATTTGGCAATGACAACGTTGTACTCGTTAGAGTCC
ACAATTTCCCAGAGAAAAGCAGCATCGGAAAATGGGAAACCTTCTTGGAC
TAAACGATTATTACTCGATAGCAAATTGCTGTGCTCANNAATTCGTGAAG
AAGCAGATGAATTATGCCCGACACTGGGAGAGAATGANGATNATTCACGT
ACTGCCTCTGAATGGCAGATGTGCTGTATATGCCATGGNTTTGCTCCGCT
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