EY649652

Overview
NameEY649652
Unique NameEY649652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY649652 vs. ExPASy Swiss-Prot
Match: CARP2_RHINI (Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 54/172 (31.40%), Postives = 83/172 (48.26%), Query Frame = 3 
Query:  336 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKCKSSHSSTYKRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNXDFIEATKEASITFLAAKFDGILGAWISRDLNWKSHSSLV-*YADQGLVKDPVFSFLVNRDIESEXWGEMGLGGGDPDHY 845
            + D +Y+G+V++GTP  T  + FDTGSS+LW  S  C    S    +K   + SSTY ++G + +I YG G + SG    D V +G L +     IE  K  + +F +    G+LG         +   + V     QGL+  P+F   + ++  +   GE   GG D   Y
Sbjct:   79 YNDIEYYGKVTVGTPGVTLKLDFDTGSSDLWFASTLCTNCGSS--QTKYNPNQSSTYAKDGRTWSISYGDGSSASGILGTDTVTLGGLKI-TKQTIELAKREATSFQSGPSYGLLGLGFDTITTVRGVKTPVDNLISQGLISKPIFGVYLGKE-SNGGGGEYIFGGYDSSKY 246
[Close]
BLAST of EY649652 vs. ExPASy Swiss-Prot
Match: ASPR1_PHARH (Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.570e-11
Identity = 59/169 (34.91%), Postives = 85/169 (50.30%), Query Frame = 3 
Query:  342 DAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKCKSSHSSTYKRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNXDFIEATKEASITFLAAKFDGILGAWISRDLNWKSHSSLV*YADQGLVKDPVFSFLVNRDIESEXWGEMGLGGGDPDHY 845
            ++ + G ++IG   Q+FTV +DTGSS+LWVPS+ C  S +C  H   K + +ST K+   + +I YG G + SG   +DNV    L   +  F   T E+S +F +   DGI G            S      +QG V  PVFSF +     +    E+ LGG +  HY
Sbjct:   94 ESLWTGPITIG--GQSFTVDWDTGSSDLWVPSSAC-SSAACNAHH--KYTLTSTGKKQSGTFSISYGDGSSASGPVYKDNVVASGLQATSQVFGAVTSESS-SFSSDPSDGISGLGWPALAQLSGTSYFWSLINQGTVTSPVFSFRL-----ATTNSELYLGGINSAHY 251
The following BLAST results are available for this feature:
BLAST of EY649652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
CARP2_RHINI1.004e-1331.40Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2[more]
ASPR1_PHARH3.570e-1134.91Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-A03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649652 ID=EY649652; Name=EY649652; organism=Citrus sinensis; type=EST; length=943bp
CCACGCGTCCGCGGACGCGTGGGCGGTCTCGTCAGTCCACTTCTTTACTC
TCTCTGTGCTCTTTTGAAATATACTCAGTTGTCGACATGGGAACCAAATT
CGCAGCCATTCGGGTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGG
CCTTCGCTTTGCCAAATGATGGATTGGTGAGAATTGGGCTGAGAAAGAAG
AAATTGGATCAGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGA
GGAAACGATGATAACACCAGTCAAAAGATATAATCTCCATGGTGGTCTTG
GAGATTCTGATACTGATATTGCTGCATTAAATAACTTTATGGATGCTCAG
TATTTTGGGGAGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGAT
ATTTGACACAGGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATT
TCTCAGTTTCTTGCTATTTCCACTCCAAGTGTAAGTCCAGCCATTCAAGT
ACCTACAAAAGGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGC
AATTTCTGGTTTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTG
TTAAGAATCANGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTC
TTGGCAGCCAAGTTTGATGGTATACTTGGGGCTTGGATTTCAAGAGATCT
CAATTGGAAAAGCCATTCCAGTCTGGTATAATATGCTGATCAAGGTCTCG
TTAAAGATCCAGTTTTTTCATTTTTGGTAAACCGTGATATTGAAAGTGAA
NAATGGGGGGAAATGGGTTTGGGGGGGGGTGATCCTGATCATTACAGGGT
GGACATACATTTGTGCCAGGACTAGNAAAGCTATGGGCAGTTGAATGGCT
GATGTCTGATNGATGGGGAACAACGGATTTTGCTCCCTGGTTG
back to top