EY702805

Overview
NameEY702805
Unique NameEY702805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.766e-42
Identity = 97/198 (48.99%), Postives = 121/198 (61.11%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYG DR  FL        E P YL GE  GDYG+D  GLS  P+ F++ +  E+IHARWAMLGA G + PE   K G   G EAVWFK GA +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D ++PGGSFDPLGLA DPD FA LKV EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.766e-42
Identity = 96/198 (48.48%), Postives = 123/198 (62.12%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YR+      ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   50 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENL 243          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.014e-41
Identity = 96/198 (48.48%), Postives = 122/198 (61.62%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D   LS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.014e-41
Identity = 94/193 (48.70%), Postives = 125/193 (64.77%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842
            WYG DR ++L  G    S  P YL+GE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   K G   G EAVWFK G+ +     L+Y G    ++   + A+ A +++L+G  E YR+  G   ++ED ++PGGSFDPLGLA DP+ FA LKV E+KNGRLAM +M GFF+ A   G+G
Sbjct:   49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.014e-41
Identity = 92/198 (46.46%), Postives = 123/198 (62.12%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    +   +++     +++L+G  E YR+  G   ++ D L+PGGSFDPLGLA+DP++ A LKV E+KNGRLAM +M GFF+ A   G+G    L
Sbjct:   48 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 241          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.014e-41
Identity = 96/198 (48.48%), Postives = 121/198 (61.11%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P  F+K +  E+IH RW MLGA G + PE F + G   G EAVWFK G+ +     L+Y G    +    + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA DP+ FA L+V EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 243          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.325e-41
Identity = 101/196 (51.53%), Postives = 123/196 (62.76%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRIHNGLDLE--DKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842
            WYG DR  FL        + P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G I PE  +K G   G EAVWFK GA +     L+Y G     NLV A  ++A    ++VL+G  E YR+  G   E  D L+PGG+FDPLGLA DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G
Sbjct:   48 WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNP---NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.730e-41
Identity = 95/198 (47.98%), Postives = 121/198 (61.11%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE F + G   G EAVW K G+ +     L+Y G    +    + A+ A +++L+G  E YR+  G    + D L+PGGSFDPLGLA+DP+ FA LKV E KNGRLAM +M GFF+ A   G+G    L
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENL 244          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.730e-41
Identity = 94/198 (47.47%), Postives = 124/198 (62.63%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            W+GPD   +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D L+PGGSFDPLGLA+ P+ FA LKV E+KNGRLAM +M GFF+PA   G+G    L
Sbjct:   12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENL 205          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 95/193 (49.22%), Postives = 121/193 (62.69%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRIHNGLDLE--DKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842
            WYG DR  +L        + P YLTGE PGDYG+D  GLS  P+ F++ +  E+IH RWAMLGA G + PE  +K G   G EAVWFK G+ +     L+Y G    I    + A+  A++VL+G  E YR+  G   E  DK++PGG+FDPLGLA DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G
Sbjct:   49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237          
The following BLAST results are available for this feature:
BLAST of EY702805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CB2_PHYPA7.766e-4248.99Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB25_NICPL7.766e-4248.48Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB25_PETSP1.014e-4148.48Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB23_POLMU1.014e-4148.70Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB23_APIGR1.014e-4146.46Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_PETSP1.014e-4148.48Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB21_LEMGI1.325e-4151.53Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB22_PETSP1.730e-4147.98Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB21_PEA1.730e-4147.47Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB26_PETSP2.260e-4149.22Chlorophyll a-b binding protein 37, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-D11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702805 ID=EY702805; Name=EY702805; organism=Citrus sinensis; type=EST; length=874bp
TCCGTCGACCCCGCGTCCGCTCTAACCTAACAAGCAGCAGCAGCAACACT
CTGAAGATGGCTTCATTGGCAGCATCGTCCACTCCTGCTGCCTCCATTGG
AGTTAAGGAGATGCTTGGCAACCCTCTCAATGTCAGCAGTGCTGTTAGGA
CTTCAGCTCCAGGTGCATCAAACCCTTCTACTTTCAAGCCCGTTGCTCTC
TTCTCCAAGAAGAAAGCCGCCCCTCCTGCCAAGTCTAAGCCCGTCGCCGT
CTCCCCCGTTAACGAAGAGCTCGCCAAGTGGTATGGTCCTGACCGAAGAA
TTTTCTTGCCCGAGGGTCTCTTGGACAGATCTGAGATCCCTGAGTACTTG
ACCGGAGAAGTTCCCGGAGACTATGGTTACGATCCTTTTGGTCTCAGCAA
GAAACCAGACGACTTCAGCAAATATCAGGCATATGAATTGATTCATGCCA
GATGGGCCATGCTTGGTGCTGCTGGTTTCATCATTCCTGAAGCCTTTAAC
AAGTTTGGTGCTAACTGTGGTCCTGAAGCTGTCTGGTTCAAGACTGGAGC
TCTACTTCTTGATGGAAACACATTGAACTACTTCGGAAAGAACATCCCAA
TCAACCTTGTTTTTGCTGTCATTGCTGAGATTGTTCTTGTAGGTGGTGCT
GAATATTATAGAATCCACAACGGTTTGGATTTGGAAGACAAGCTTCACCC
AGGTGGCTCATTTGACCCCCTGGGATTAGCAAAGGATCCTGACCAATTTG
CATTGCTAAAAGTGAACGAGATCAAGAATGGAAGACTTGCCATGCTTGCC
ATGCCTGGGTTCTTTCTCCCAGCTTAGGCACCAGGGGAAGGCCAGTGGAG
AACCTTGCTAAACATTCACGGAAT
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