EY702805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.585e-18 Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 3 Query: 339 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRIHN-------------GLDLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTLL 860 P YLTG +PGD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F G P+ W+ G YF + + ++ +++ V + + I N L + +PGG F+PL A + K EI NGRLAMLA GF + G+G + LL Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPK--WYAAG-------KEEYFASSSTLFVIEFILSHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLE----AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLL 234
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.275e-17 Identity = 58/119 (48.74%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 501 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGLDLE--DKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842 KFG EAVWFK GA + L+Y G I + A+ A ++VL+G E YR+ G E D L+PG +FDPLGLA DP+ A LKV EIKNGRLAM +M GFF+ A G+G Sbjct: 9 KFG-----EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 122
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.291e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 627 EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857 ++VL+G E YRI G ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A G+G L Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.291e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 627 EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857 ++VL+G E YRI G ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A G+G L Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.291e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 627 EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857 ++VL+G E YRI G ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A G+G L Sbjct: 15 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 93
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.291e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 627 EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857 ++VL+G E YRI G ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A G+G L Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.291e-16 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 627 EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857 ++VL+G E YRI G ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A G+G L Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14 Identity = 45/86 (52.33%), Postives = 55/86 (63.95%), Query Frame = 3 Query: 603 NLVFAVIAEIVLVGGAEYYRIHN------GLDLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842 +L+ + +++L+G E YR N G DL D+L+PGG FDPLGLA DPD F LKV EIKNGRLAM M GF+ A GEG Sbjct: 10 SLLAILATQVLLMGAVEGYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEG 94
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.075e-14 Identity = 57/174 (32.76%), Postives = 80/174 (45.98%), Query Frame = 3 Query: 330 SEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRIHNGLDLE----DKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGE 839 +E P LTGE P D G+DP L+ PD +++ + E+ H R AML G I+PE K WF+ G +DG L + + + EY+R G + + D+ +PG FDPL L D + A E+KNGRLA+ A+ G A GE Sbjct: 194 AEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK--------GAWFEAGD-SVDGLKLGFI--------------TMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTDYTRAA-----EVKNGRLALTAVAGLTAQYLATGE 337 HSP 2 Score: 74.3294 bits (181), Expect = 9.893e-13 Identity = 59/180 (32.78%), Postives = 82/180 (45.56%), Query Frame = 3 Query: 339 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRIHNGL-----DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTLLN 863 P YLTGE GD G+DP GL+ P F + Q E+ H R +ML G ++PE WF+ + D N FAV+A + +V EY+R + G + D+ +PG FDPL L + K EIKNGRLAM M G + + G+ L++ Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG--------NGAWFQ----IWDKVDFNR----------FAVVA-LQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMNGMFGLEVQSHVTGKSPINNLID 530
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.603e-13 Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 627 EIVLVGGAEYYRIHNGLDL---EDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857 +++L+G E YR+ L ED L+PGGSFDPL DP+ FA LKV EIKNGRLAM +M GFF+ A G+G L Sbjct: 22 QVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 101 The following BLAST results are available for this feature:
BLAST of EY702805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702805 ID=EY702805; Name=EY702805; organism=Citrus sinensis; type=EST; length=874bpback to top |