EY702791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.511e-48 Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 2 Query: 545 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADPVN 850 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKN RLAMFSMFGFFVQAIVTG+GPLEN H+ADPVN Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253 HSP 2 Score: 22.3274 bits (46), Expect = 1.511e-48 Identity = 8/15 (53.33%), Postives = 9/15 (60.00%), Query Frame = 1 Query: 841 PCQYNAWAYATTLSP 885 P NAWA+AT P Sbjct: 251 PVNNNAWAFATNFVP 265
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.511e-48 Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 2 Query: 545 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADPVN 850 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKN RLAMFSMFGFFVQAIVTG+GPLEN H+ADPVN Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253 HSP 2 Score: 22.3274 bits (46), Expect = 1.511e-48 Identity = 8/15 (53.33%), Postives = 9/15 (60.00%), Query Frame = 1 Query: 841 PCQYNAWAYATTLSP 885 P NAWA+AT P Sbjct: 251 PVNNNAWAFATNFVP 265
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.589e-48 Identity = 94/102 (92.16%), Postives = 97/102 (95.10%), Query Frame = 2 Query: 545 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADPVN 850 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKN RLAMFSMFGFFVQAIVTG+GPLEN HLADPVN Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 102
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.589e-48 Identity = 94/102 (92.16%), Postives = 97/102 (95.10%), Query Frame = 2 Query: 545 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADPVN 850 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKN RLAMFSMFGFFVQAIVTG+GPLEN HLADPVN Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.589e-48 Identity = 94/102 (92.16%), Postives = 97/102 (95.10%), Query Frame = 2 Query: 545 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADPVN 850 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKN RLAMFSMFGFFVQAIVTG+GPLEN HLADPVN Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.537e-46 Identity = 93/110 (84.55%), Postives = 97/110 (88.18%), Query Frame = 2 Query: 524 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADPVN 850 LDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPL DPEAFAELKVKEIKN RLAMFSMFGFFVQAIVTG+GPLEN HLADPVN Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 110
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.216e-33 Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 545 SLIHAQSILAIWACQVVLMGAVEGYRI---AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADP 844 +LIHA+S+LAI A QV+LMGAVEGYR A G GE D LYPGG FDPLGLADDP+ F ELKVKEIKN RLAM M GF+ QAIVTG+GP+ENW HL DP Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDP 106
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.932e-31 Identity = 92/239 (38.49%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 137 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNARLAMFSMFGFFV-QAIVTGQGPLENWXRHLADP 844 VG LAPS +G T S V+ + W+ G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L G W KA +G YLGNP + ++ I A + + + E R + YPGG+FDPLG + DP F ELK+KEIKN RLAM + GF V Q+ G GPLEN HLADP Sbjct: 13 VGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWF-----------PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTMEK---DPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADP 228
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.707e-31 Identity = 78/192 (40.62%), Postives = 105/192 (54.69%), Query Frame = 2 Query: 290 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGL-ADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADP 844 PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + +L WA ++ G V I TD YPGG FDPLG + P EL+ KEIKN RLAM ++ G + Q I TG GP++N HLADP Sbjct: 74 PPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY702791 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.951e-30 Identity = 84/218 (38.53%), Postives = 112/218 (51.38%), Query Frame = 2 Query: 212 GSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGL-ADDPEAFAELKVKEIKNARLAMFSMFGFFVQAIVTGQGPLENWXRHLADP 844 GS+SV+ + PDR + PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q + + +L + +L WA ++ G V I TD YPGG FDPLG + P EL+ KEIKN RLAM ++ G + Q I TG GP++N HLADP Sbjct: 50 GSRSVAVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQEY------FTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 The following BLAST results are available for this feature:
BLAST of EY702791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702791 ID=EY702791; Name=EY702791; organism=Citrus sinensis; type=EST; length=923bpback to top |