EY649559

Overview
NameEY649559
Unique NameEY649559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649559_ssr113 microsatellite EY649559_ssr113:113..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_GIBZE (Histone acetyltransferase type B subunit 2 OS=Gibberella zeae GN=HAT2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.058e-11
Identity = 62/202 (30.69%), Postives = 91/202 (45.05%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE-------ARSPFVKKFKTII-----HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVL-SGGKDKSVVLW 584
            ER +++ Y  WK   P L        L WP+L+ +W P +++   KN +  RL L   T    PN L IA+ ++ K     A +   ++EE        +S  V   K  I     HPGEVN+ R  PQN  I+AT      +LI+D    P         ++  +L+  GH+    F L   P E   L SG +D ++ LW
Sbjct:   15 ERLINEEYKTWKKNSPFLTA------LTWPTLTVQWFPDVKEPEGKNYKIHRLLLGTHTSDESPNYLQIADVQIPK---VVAPNPDDYDEERGEIGGYGKSGDVAAIKCDIVQRIEHPGEVNKARYQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELV--GHEAEG-FGLNWNPHEEGCLASGSEDTTMRLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_YEAST (Histone acetyltransferase type B subunit 2 OS=Saccharomyces cerevisiae GN=HAT2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.912e-11
Identity = 52/193 (26.94%), Postives = 80/193 (41.45%), Query Frame = 3
Query:   30 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            SVD+ Y  WKS VP++YD+++   L WPSL+ +W P   Q       +Q L +   T G   N L  A   + K  ++  +   +  EE +S        ++      H  E+ R R +PQ+  IVAT      V ++             +        L  H+DN          +  +LSG  D +V LW
Sbjct:    9 SVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQDPNIVATINGQGTVFLY-------------SRSEGLQSTLKFHKDNGYALSFSTLVKGRLLSGSDDHTVALW 188          
The following BLAST results are available for this feature:
BLAST of EY649559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
HAT2_GIBZE6.058e-1130.69Histone acetyltransferase type B subunit 2 OS=Gibb... [more]
HAT2_YEAST7.912e-1126.94Histone acetyltransferase type B subunit 2 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649559 ID=EY649559; Name=EY649559; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACA
CAATGGAAGTCCTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAA
CCTCGTTTGGCCCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAG
CTACATACAAGAATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGC
AGTGTTCCAAATACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCG
AGTTGCAGCTGCAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCAC
CCTTTGTAAAGAAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGA
ATAAGAGAACTCCCACAGAACAGTAAAATAGTAGCCACACACACTGATAG
TCCTGATGTCCTCATTTGGGATGTTGAGGCACAACCTAATCGCCATGCTG
TCTTATGAGCTGCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAA
GATAATGCTGAATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCT
CTCTGGAGGCAAGGATAAGTCAGTGGTTTTATGGAGCATNCAAGACCATG
TCTCGGCTTTGGCAGCAGAACCAGGTTCTGCAAAATCTACAGCTTCTGGC
GGTGCCAACTCTAAAAAATGCTNCAGAGTGGTGGGAATGGGTGATAACCT
CTANAGAGCCCTTCTTTGGGGCACGATGTAAATACCTAGGNCATGAAGAC
ACTNGTGAAGACGTTCAGTNCTGTCCCATCAAGTGCACAGAGTNCTGCAN
TGTAGGTGATGATTCNTGCCTATACTATGGGATGGCAGATCTGGCTCTAC
TTCAGCTGTCAAGTTTGAAAAANCCATAATGCTGATATTCATGGGGTGAT
GGAATCCCCATGATGTGATCTAATAGGACGGGGGATTAT
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