EG358344

Overview
NameEG358344
Unique NameEG358344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length998
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358344_ssr10 microsatellite EG358344_ssr10:10..21. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6868 contig Csv1_Contig6868:1..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.134e-26
Identity = 80/245 (32.65%), Postives = 131/245 (53.47%), Query Frame = 1
Query:  160 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSSHLQGEVVK-DWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQK---IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV 879
            P+I+L  +   G +R    + I +ACE+WG F++V+HG+  +++  + +     +    E++ K ++   K         +Q EV   DW    T+F       + S  PD  + + EV ++++ +L  +A +LL++L E +GLEK  L KA            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD+    I V P+  + V+NLGD    ++NG++K+  H+ +
Sbjct:    5 PIINLENL--CGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFK-ELVASKG-----LEAVQAEVTDLDWES--TFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVI 237          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.934e-26
Identity = 85/276 (30.80%), Postives = 130/276 (47.10%), Query Frame = 1
Query:   61 LTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSS---HLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV 879
            L A     +L  SFV   D+ P       S  +P+I      D+   R E+ + I+EA ++ G FQVV+HGV  +++ DM  +  +FF LP  +K         K   + S       GE  K WR+ +            + WPD P+G  +V ++++ +   V  +LL +L E MG++ +         +  + +N+YP CP PD  LG   H D   ITLLL   V GL+ +       I V P   AFVVN G     ++NG  K+ +H+A+
Sbjct:    5 LHATPAHVSLPESFVFASDKVPPATKAVVS--LPII------DLSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGE--KYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKG--DWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAM 268          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.526e-26
Identity = 83/249 (33.33%), Postives = 135/249 (54.22%), Query Frame = 1
Query:  160 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSSHLQGEVVK-DWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV*TQT 891
            P+I+L  ++  G +RA+  + I +ACE+WG F++V+HG+  +++  + ++    +    E++ K ++   K         +Q EV   DW    T+F       +    PD  + + EV ++++ +L  +A +LL++L E +GLEK  L K             V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD     I V P+  + VVNLGD    ++NG++K+  H+ + TQT
Sbjct:    5 PIINLEKLN--GSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFK-ELVASKG-----LEAVQAEVTDLDWES--TFFLRHLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDG--QWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVI-TQT 240          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.526e-26
Identity = 80/230 (34.78%), Postives = 123/230 (53.48%), Query Frame = 1
Query:  202 RAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQK---IVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV 879
            R    + I +ACE+WG F+ V+HG+  +++  + +L  E +    E++ K +M    KG   V S +      DW    T+F         S  PD  + + +V KE++ KL  +A +LL++L E +GLEK  L KA            V+ YP CP+P+L  GL+ HTD G I LL Q D+V GLQ  KD+    I V P+  + V+NLGD    ++NG++K+  H+ +
Sbjct:   17 RKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFK-EMVA-TKGLECVQSEIDD---LDWES--TFFLRHLPVSSISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVI 237          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.526e-26
Identity = 84/247 (34.01%), Postives = 129/247 (52.23%), Query Frame = 1
Query:  154 EIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSSHLQGEVVK-DWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV 879
            + PV+ L+ +  +G +R +    I +ACE+WG F++V+HG+   L+ +  ++  E + +  E+K   DM   K        +L+ EV   DW E   Y     QS  Y   PD  + +    K++  +L  +A  LL++L E +GLEK  L K             V+ YP CP+P++  GL+ HTD G I LL Q D+V GLQ  KD     I V P+  + V+NLGD    ++NGR+K+  H+ V
Sbjct:    6 KFPVVDLSKL--IGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFN-DMLKSKG-----LENLEREVEDVDW-ESTFYLRHLPQSNLYD-IPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDG--DWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVV 240          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.600e-26
Identity = 76/243 (31.28%), Postives = 119/243 (48.97%), Query Frame = 1
Query:  157 IPVISLAGIDDVGG-KRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPE-EKLKFDMTGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV 879
            IP I L G D     K     + I EA   WG FQV++HGV  +L+  M     +F   PPE  K  +    G+K  ++ +  L      +WR+    +  P    D     D PE   +V  EYS ++M +   L E+LSEA+GL    L         +++ +Y+P CP+PDLT G  +H+D   +T+LL D + GLQ  ++       V  + GA ++N+GD    ++N +F +  H+ +
Sbjct:   64 IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAP----DPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREG--YWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVL 300          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.254e-25
Identity = 71/233 (30.47%), Postives = 115/233 (49.36%), Query Frame = 1
Query:  181 IDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLK-FDMTGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQA 876
            I D+   R E+ + I+++ +++G  QVV+HG+   ++ +M  +  EFF +P E+K + F     ++      S  +    K W +++    +P  S D   WP KP+   EV   Y+    GVA ++L +L E +GL  +            + +NYYP  P P  TLGL  H D   +T+LL   V GL+     G   I VQP+  + V+N G     ++NG  K  +H+A
Sbjct:   37 IIDMSRGRDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGG--WIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRA 266          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.254e-25
Identity = 75/256 (29.30%), Postives = 125/256 (48.83%), Query Frame = 1
Query:  130 VAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKE------ALTKACVDMDQKIV-VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQA 876
            V+++     IPVI L+  D        +   I +A + WG FQ+ +HG+  KL+ D+  L+   F +P E KL+   +     G+           K W E  T      ++   + WP     +  + +EY D++  +A +LL  +  ++G+  E       L K+   + +  + +N+YP CP+P+  +GL  HTD   +T+L Q   GGLQ  ++     +TV+P  G  VVN+GD  H LSNG+  +  H+A
Sbjct:   40 VSFDAVEESIPVIDLSNPD--------VTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREE-SGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRA 286          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 6.223e-25
Identity = 86/295 (29.15%), Postives = 141/295 (47.80%), Query Frame = 1
Query:   70 LAGEKTLNPSFVRFQDERP-KVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGFIVSSHLQGEVVKDWREIVTY----------------FSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGL---EKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV*TQTA 894
            L+G+  +   F+   +E P  VA  E   E+ +I +      G +R+ + +++ EACE  G F VV+HG++A L+ +  R    FF LP  EK +     G+  G+  S   +      W+E +++                +   K   ++ R         EV   Y  ++  ++ +L+EVL E++G+    +    +     D  + +NYYP C +P  TLG   H DP ++T+L QD VGGL+   +     I  +P  GA VVN+GD    LSN R+++  H+AV   TA
Sbjct:   18 LSGQTEIPSQFIWPAEESPGSVAVEEL--EVALIDVGA----GAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLG------EVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRP--GALVVNVGDTFMALSNARYRSCLHRAVVNSTA 298          
BLAST of EG358344 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.223e-25
Identity = 80/230 (34.78%), Postives = 112/230 (48.70%), Query Frame = 1
Query:  232 ACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMTGGKKGGF---IVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWME---VTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV--------VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTCITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAV 879
            A +DWG F +V HGV   L+  +       FALP  EK++     G   G+    +SS     +   W E  T+     +S     WP     +     V +E+  ++  +A KLLE+   A+GL  E +  A V+ +QKI         +N+YPKCP P   LGL  HTD G  T +LQ  V GLQ  +      +TV  + GA VVN+GD    L+NGRF +  H+AV
Sbjct:   66 AAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCM---WSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQV--AAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAV 290          
The following BLAST results are available for this feature:
BLAST of EG358344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO4_PETHY1.134e-2632.651-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
IDS3_HORVU1.934e-2630.802'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO_TOBAC2.526e-2633.331-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PEA2.526e-2634.781-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_BRAJU2.526e-2634.011-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCH2_ARATH9.600e-2631.281-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
IDS2_HORVU1.254e-2530.47Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3OX4_ARATH1.254e-2529.30Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
GAOX1_ORYSJ6.223e-2529.15Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G3O23_WHEAT6.223e-2534.78Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank description12a3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012a3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358344 ID=EG358344; Name=EG358344; organism=Citrus sinensis; type=EST; length=998bp
ACGCGGGGATATTATTATTATTTGTGCTTCATCGATCATCAATTCATGGC
TCCTTCAACCCTCACCGCCCTTGCTGGGGAGAAAACCCTCAACCCAAGCT
TTGTCCGCTTTCAAGATGAGCGTCCCAAGGTGGCTTATAATGAATTCAGC
AATGAAATTCCTGTGATTTCACTTGCTGGGATTGATGACGTCGGTGGCAA
AAGGGCTGAGATTTGCAAGAAAATTGTTGAGGCGTGTGAGGACTGGGGAA
TCTTTCAAGTTGTTGATCATGGTGTTGATGCTAAGCTTATATCCGATATG
ACTCGTCTTGCTACAGAATTTTTCGCCCTGCCCCCTGAGGAGAAGCTCAA
GTTTGATATGACCGGTGGGAAGAAGGGTGGCTTCATTGTCTCTAGCCACC
TTCAGGGTGAAGTAGTAAAAGATTGGCGTGAAATAGTGACGTATTTCTCA
TTCCCAAAGCAAAGCCGAGATTACTCACGTTGGCCGGACAAGCCAGAAGG
CTGGATGGAAGTAACAAAAGAATACAGTGACAAATTAATGGGAGTGGCGT
GCAAGCTTCTGGAAGTTTTATCAGAGGCAATGGGATTGGAGAAGGAAGCT
TTGACCAAAGCATGTGTGGACATGGACCAAAAGATTGTTGTCAATTACTA
TCCAAAATGCCCACAACCCGACCTCACTCTCGGACTCAAACGCCACACGG
ATCCGGGAACCATCACACTCTTGCTCCAAGATCAAGTTGGTGGCCTCCAG
GCTACCAAGGATAATGGTAAGACGTGCATCACCGTTCAACCTATTGAAGG
TGCTTTTGTGGTCAATCTGGGTGATCATGGTCATTATCTGAGCAATGGGA
GGTTTAAGAACGCGGATCACCAAGCAGTGTGAACTCAAACAGCAGCAGAT
TATCGATTGCTACATTCCAAAACCCAGCACAGAGGCAACAGTGTATCCAC
TCAAGATAAGAGAGGGAAGAGAAGCTGTACTCGGCTGCGAACCACGCT
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