EG358337

Overview
NameEG358337
Unique NameEG358337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length491
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 6.944e-24
Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 3
Query:    9 ELVRLSGRLMKALSINLGISEDRLQNAF----GGDNIG-ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVT--GLQV-RKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFY-NPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            E+ +L+ RL+  +  +LG++ + ++ A      G  +G   +R+N YP CP+P+  +GL++H+D   LT+L   HQ    GLQV R+   W+TV+PA    +VNIGD   +LSN    SV HR  VN    R+S+A+ +  P  D+ I P+ +L     PSLY  +T+ E
Sbjct:  166 EMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTIL---HQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKE 332          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.547e-23
Identity = 58/166 (34.94%), Postives = 95/166 (57.23%), Query Frame = 3
Query:    6 KELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG---ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGD-NWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            + + +L+ +LM     +LG+ E  +Q A    +     A +++N YPKCP+PD  +GL++H+D   +T+L   +   GLQV + D  W+T  P   + +VN+GD + +L+N  + SV HR  VN    R S+A+ + P SDI I P+ +LV      LYP +T+ +
Sbjct:  165 EHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILY-QNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLVDPLQSPLYPSLTWKQ 329          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.020e-23
Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 3
Query:   33 LMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIP-------IEPVKELVTEESPSLYPPMT 482
            L + LS  LG+  + L+     +  G  L  ++YP CPQP+LT G S HSD G LT+L+ D Q+ GLQ+   + WI V     A ++NI D +Q+++N  +KSVEHRV  N    R+S+A  +  K+            P+KEL++EE+P +Y  +T
Sbjct:  222 LFELLSEALGLKPNHLEEMDCAE--GLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVT 375          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23
Identity = 54/137 (39.42%), Postives = 84/137 (61.31%), Query Frame = 3
Query:    9 ELVRLSGRLMKALSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSD 416
            +L  L+ +++  LS+ LG+ E RL+   GG + +    ++N+YPKCPQP+L LG+ +H+D   LT +L  + V GLQ+     W+T K   ++ I++IGD I++LSN  YKS+ HR  VN    R+S A F  P  +
Sbjct:  181 KLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFIL-HNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKE 316          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.310e-22
Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = 3
Query:   21 LSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            LS ++M+ LS  LG+  + ++   G   +   + +N YP  P  D   GL  H+D  GLTL++ + ++ GLQV K D+WI V+    A IVNIGDQI +LSN  YK+V H+  V+    R+S     +P  D+ + P+ EL +E+ P  + P+ + +
Sbjct:  126 LSEKIMEWLSEGLGLGREAIKEVNGCWYV---MNINHYPPYPHSDSFNGLEPHTDINGLTLIITN-EIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSEDDPPKFKPIAYKD 278          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.310e-22
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 3
Query:    6 KELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNP---KSDIPIEPVKELVTEESPSLYPPMT 482
            K++ +L   L++ LS  LG+    L++    D        N+YP CPQP+LT+G   H+D G +T+LL D  + GLQV   ++W+ V P   + +VNIGD +Q+LSN  Y SVEHR   N+   R+S+  F+     +S     P+ EL++E++P  Y   T
Sbjct:  181 KDVKKLGFTLLELLSEGLGLDRSYLKDYM--DCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQD-DMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATT 339          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.710e-22
Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 3
Query:   21 LSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTE 452
            L+G + K L +   I    L+  F  ++          P        LGLS HSD  GLTLL+  ++V GL ++K + W+ +KP   AF+VNIGD I+++SN  YKS+EHR  +N+  ER+S+A F++P+    I P+ +LV E
Sbjct:  183 LTGMMAKNLGLESEILTKPLRTVFNRED-------ELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKE 319          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.710e-22
Identity = 52/132 (39.39%), Postives = 80/132 (60.61%), Query Frame = 3
Query:   99 DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSD-IPIEPVKELVTEESPSLYPPMTFDE 491
            D++   L++N+YP+CPQP+L +G+ +H+D   L+ +L  + V GLQV  G  W+T +      IV++GD +++LSN  Y SV HR  VN    R+S   F  P  D + + P+ ELVTE  P+ + P TF +
Sbjct:  228 DDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFIL-HNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQ 358          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.977e-22
Identity = 57/168 (33.93%), Postives = 96/168 (57.14%), Query Frame = 3
Query:    6 KELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG----ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQV-RKG-DNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            +E+  L+ +L++   + LG++ +++        I     A + +N+YPKCP P   LGL +H+D G  T +L    V GLQ+ R G D W+TV     A +VN+GD  Q+L+N  + SV HR  VN  ++R+SL +F  P + + + P++E +   +P+ Y  +T+ E
Sbjct:  168 REMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREALA-GTPAAYRAVTWPE 333          
BLAST of EG358337 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.500e-22
Identity = 57/168 (33.93%), Postives = 96/168 (57.14%), Query Frame = 3
Query:    6 KELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG----ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQV-RKG-DNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDE 491
            +E+  L+ +L++   + LG++ +++        I     A + +N+YPKCP P   LGL +H+D G  T +L    V GLQ+ R G D W+TV     A +VN+GD  Q+L+N  + SV HR  VN  ++R+SL +F  P + + + P++E +   +P+ Y  +T+ E
Sbjct:  168 REMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALA-GTPAAYRAVTWPE 333          
The following BLAST results are available for this feature:
BLAST of EG358337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3OX4_ARATH6.944e-2437.06Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G3OX2_ARATH1.547e-2334.94Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
DV4H_CATRO2.020e-2338.22Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
LDOX_VITVI2.639e-2339.42Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FLS_MATIN1.310e-2236.31Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCH3_SOLLC1.310e-2237.041-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
NCS1_COPJA1.710e-2238.19S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_MAIZE1.710e-2239.39Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
G3O23_WHEAT4.977e-2233.93Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3O22_WHEAT6.500e-2233.93Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank description4h12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004h12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358337 ID=EG358337; Name=EG358337; organism=Citrus sinensis; type=EST; length=491bp
ACTGCAAGGAATTGGTGCGACTAAGTGGGAGGTTAATGAAGGCTTTATCG
ATTAATCTTGGAATAAGCGAAGATCGATTACAGAATGCATTTGGTGGTGA
TAATATTGGAGCCTGTTTGAGGGTTAATTTTTATCCAAAGTGTCCGCAGC
CCGACTTAACACTTGGCTTGTCGTCGCATTCGGACCCCGGCGGCTTGACC
CTACTCTTGCCGGACCATCAAGTCACCGGTCTTCAAGTCCGCAAAGGCGA
TAATTGGATCACCGTGAAGCCGGCCAAGCATGCTTTCATCGTCAACATTG
GCGATCAAATTCAGGTTCTAAGCAATGCAAATTACAAGAGCGTGGAGCAC
AGAGTGGCTGTGAATTCAGCAAACGAAAGAGTCTCGCTTGCTTTCTTCTA
CAATCCGAAAAGTGACATCCCAATTGAACCAGTCAAAGAGCTAGTTACAG
AAGAAAGCCCTTCGCTTTATCCGCCAATGACGTTTGATGAG
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